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Report for CCDS12503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12503.1 Public Homo sapiens 19 ZNF569 24 110 108 CCDS HistoryNCBI Gene:148266Re-query CCDS DB by CCDS ID:12503.1Re-query CCDS DB by GeneID:148266See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12503.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316950.11 ENSP00000325018.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316950.11Link to Ensembl Protein Viewer:ENSP00000325018.5Re-query CCDS DB by Nucleotide ID:ENST00000316950Re-query CCDS DB by Protein ID:ENSP00000325018
Original member Current member EBI ENST00000392149.6 ENSP00000375992.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392149.6Link to Ensembl Protein Viewer:ENSP00000375992.2Re-query CCDS DB by Nucleotide ID:ENST00000392149Re-query CCDS DB by Protein ID:ENSP00000375992
Original member Current member NCBI NM_152484.3 NP_689697.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152484.3Link to Protein Sequence:NP_689697.2Re-query CCDS DB by Nucleotide ID:NM_152484Re-query CCDS DB by Protein ID:NP_689697Link to BLAST:NP_689697.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689697.2 686 Q5MCW4-1 686 100% 0 0

Chromosomal Locations for CCDS 12503.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37412597 37414419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37425868 37425963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37426252 37426378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37444907 37444921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2061 nt):
ATGACTGAGTCCCAGGGAACAGTAACATTCAAAGATGTGGCTATCGACTTCACTCAGGAGGAGTGGAAGA
GATTGGATCCTGCTCAGAGAAAACTGTACCGGAATGTGATGCTAGAAAACTATAACAACTTAATCACAGT
AGGCTATCCGTTCACCAAACCTGATGTGATTTTCAAATTGGAGCAAGAAGAAGAACCATGGGTGATGGAG
GAAGAAGTATTAAGGAGACACTGGCAAGGAGAAATATGGGGAGTTGATGAGCATCAGAAAAACCAGGACA
GACTTTTGAGACAAGTTGAAGTTAAATTCCAGAAAACACTGACTGAAGAAAAAGGCAATGAATGTCAAAA
GAAATTTGCAAATGTATTTCCTCTGAACTCTGATTTTTTCCCTTCCAGACACAATCTCTATGAGTATGAC
TTATTTGGAAAGTGTTTAGAACATAATTTTGACTGTCATAATAATGTGAAATGCCTTATGAGAAAGGAGC
ATTGTGAATATAATGAACCTGTGAAATCATATGGTAATAGCTCATCCCATTTTGTCATTACCCCCTTTAA
GTGTAATCATTGTGGAAAAGGCTTCAATCAGACTTTGGACCTCATCAGACATCTGAGAATTCATACTGGA
GAGAAGCCCTATGAATGTAGTAACTGTAGAAAAGCCTTCAGTCACAAGGAAAAACTTATTAAACATTATA
AAATTCACAGTAGGGAGCAGTCTTACAAATGTAATGAATGTGGTAAAGCTTTCATTAAAATGTCAAATCT
CATTAGACATCAAAGAATTCATACTGGAGAGAAGCCCTATGCATGTAAGGAATGTGAGAAGTCCTTCAGC
CAGAAATCAAATCTTATTGATCATGAAAAAATTCATACTGGAGAGAAACCTTATGAATGTAATGAGTGTG
GAAAAGCATTCAGCCAGAAGCAAAGCCTCATTGCACATCAGAAAGTTCATACTGGGGAGAAACCTTATGC
ATGTAATGAATGTGGTAAAGCCTTCCCTCGAATTGCATCCCTTGCTCTTCATATGAGAAGTCATACAGGA
GAAAAACCTTATAAATGTGATAAATGTGGTAAAGCCTTCTCTCAGTTTTCCATGCTTATTATACATGTTA
GAATTCATACAGGTGAAAAACCCTATGAATGTAATGAGTGTGGAAAAGCCTTCTCTCAAAGCTCAGCCCT
TACTGTACATATGAGAAGTCACACTGGTGAGAAACCCTATGAATGTAAGGAATGCAGAAAAGCCTTCAGC
CACAAGAAAAACTTCATTACACACCAGAAAATTCATACTAGAGAGAAACCTTATGAGTGTAATGAATGTG
GGAAAGCTTTTATACAGATGTCAAATCTTGTTAGACACCAGAGAATTCATACTGGGGAAAAACCCTATAT
ATGTAAGGAATGTGGGAAAGCCTTTAGCCAGAAATCAAATCTCATTGCTCATGAAAAAATTCATTCTGGA
GAGAAACCCTATGAATGCAATGAATGTGGTAAAGCCTTCAGCCAAAAGCAAAACTTCATTACACATCAAA
AAGTTCATACTGGAGAGAAACCTTATGATTGTAATGAATGTGGTAAAGCCTTCTCTCAAATTGCATCCCT
TACCCTTCATTTGAGAAGTCATACAGGGGAAAAGCCTTATGAATGTGATAAATGTGGTAAAGCCTTCTCT
CAGTGCTCACTGCTTAATTTACATATGAGAAGTCACACAGGTGAGAAGCCCTATGTATGTAATGAATGTG
GGAAAGCCTTCTCTCAAAGAACTTCCCTTATTGTGCACATGAGAGGCCATACAGGTGAAAAACCCTATGA
ATGTAATAAATGTGGAAAAGCCTTCTCCCAAAGCTCATCCCTTACTATACATATACGAGGACATACAGGT
GAGAAACCCTTCGACTGTAGTAAATGTGGAAAAGCCTTCTCTCAAATCTCATCTCTTACCCTTCATATGA
GAAAACATACAGGTGAGAAGCCCTATCACTGTATTGAGTGTGGCAAGGCTTTCAGCCAAAAGTCGCACCT
TGTTAGACACCAGAGAATTCATACTCATTAG

Translation (686 aa):
MTESQGTVTFKDVAIDFTQEEWKRLDPAQRKLYRNVMLENYNNLITVGYPFTKPDVIFKLEQEEEPWVME
EEVLRRHWQGEIWGVDEHQKNQDRLLRQVEVKFQKTLTEEKGNECQKKFANVFPLNSDFFPSRHNLYEYD
LFGKCLEHNFDCHNNVKCLMRKEHCEYNEPVKSYGNSSSHFVITPFKCNHCGKGFNQTLDLIRHLRIHTG
EKPYECSNCRKAFSHKEKLIKHYKIHSREQSYKCNECGKAFIKMSNLIRHQRIHTGEKPYACKECEKSFS
QKSNLIDHEKIHTGEKPYECNECGKAFSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTG
EKPYKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECGKAFSQSSALTVHMRSHTGEKPYECKECRKAFS
HKKNFITHQKIHTREKPYECNECGKAFIQMSNLVRHQRIHTGEKPYICKECGKAFSQKSNLIAHEKIHSG
EKPYECNECGKAFSQKQNFITHQKVHTGEKPYDCNECGKAFSQIASLTLHLRSHTGEKPYECDKCGKAFS
QCSLLNLHMRSHTGEKPYVCNECGKAFSQRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLTIHIRGHTG
EKPFDCSKCGKAFSQISSLTLHMRKHTGEKPYHCIECGKAFSQKSHLVRHQRIHTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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