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Report for CCDS12451.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12451.2 Public Homo sapiens 19 LSR 24 110 108 CCDS HistoryNCBI Gene:51599Re-query CCDS DB by CCDS ID:12451.2Re-query CCDS DB by GeneID:51599See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 12451.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360798.7 ENSP00000354034.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360798.7Link to Ensembl Protein Viewer:ENSP00000354034.3Re-query CCDS DB by Nucleotide ID:ENST00000360798Re-query CCDS DB by Protein ID:ENSP00000354034
Original member Current member NCBI NM_205835.4 NP_991404.2 Accepted alive Link to Nucleotide Sequence:NM_205835.4Link to Protein Sequence:NP_991404.2Re-query CCDS DB by Nucleotide ID:NM_205835Re-query CCDS DB by Protein ID:NP_991404Link to BLAST:NP_991404.2

Chromosomal Locations for CCDS 12451.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35249023 35249131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35250315 35250659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35258945 35259064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35266359 35266532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35266679 35266738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35266836 35266967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35267109 35267734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35267824 35267859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGGCGCTGTTGGCCGGCGGGCTCTCCAGAGGGCTGGGCTCCCACCCGGCCGCCGCAGGCCGGGACGCGG
TCGTCTTCGTGTGGCTTCTGCTTAGCACCTGGTGCACAGCTCCTGCCAGGGCCATCCAGGTGACCGTGTC
CAACCCCTACCACGTGGTGATCCTCTTCCAGCCTGTGACCCTGCCCTGTACCTACCAGATGACCTCGACC
CCCACGCAACCCATCGTCATCTGGAAGTACAAGTCTTTCTGCCGGGACCGCATCGCCGATGCCTTCTCCC
CGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCAGCCGGGAACCCAGGCTACAACCCCTACGTTGA
GTGCCAGGACAGCGTGCGCACCGTCAGGGTCGTGGCCACCAAGCAGGGCAACGCTGTGACCCTGGGAGAT
TACTACCAGGGCCGGAGGATTACCATCACCGGAAATGCTGACCTGACCTTTGACCAGACGGCGTGGGGGG
ACAGTGGTGTGTATTACTGCTCCGTGGTCTCAGCCCAGGACCTCCAGGGGAACAATGAGGCCTACGCAGA
GCTCATCGTCCTTGTGTATGCCGCCGGCAAAGCAGCCACCTCAGGTGTTCCCAGCATTTATGCCCCCAGC
ACCTATGCCCACCTGTCTCCCGCCAAGACCCCACCCCCACCAGCTATGATTCCCATGGGCCCTGCCTACA
ACGGGTACCCTGGAGGATACCCTGGAGACGTTGACAGGAGTAGCTCAGCTGGTGGCCAAGGCTCCTATGT
ACCCCTGCTTCGGGACACGGACAGCAGTGTGGCCTCTGAAGTCCGCAGTGGCTACAGGATTCAGGCCAGC
CAGCAGGACGACTCCATGCGGGTCCTGTACTACATGGAGAAGGAGCTGGCCAACTTCGACCCTTCTCGAC
CTGGCCCCCCCAGTGGCCGTGTGGAGCGGGCCATGAGTGAAGTCACCTCCCTCCACGAGGACGACTGGCG
ATCTCGGCCTTCCCGGGGCCCTGCCCTCACCCCGATCCGGGATGAGGAGTGGGGTGGCCACTCCCCCCGG
AGTCCCAGGGGATGGGACCAGGAGCCCGCCAGGGAGCAGGCAGGCGGGGGCTGGCGGGCCAGGCGGCCCC
GGGCCCGCTCCGTGGACGCCCTGGACGACCTCACCCCGCCGAGCACCGCCGAGTCAGGGAGCAGGTCTCC
CACGAGTAATGGTGGGAGAAGCCGGGCCTACATGCCCCCGCGGAGCCGCAGCCGGGACGACCTCTATGAC
CAAGACGACTCGAGGGACTTCCCACGCTCCCGGGACCCCCACTACGACGACTTCAGGTCTCGGGAGCGCC
CTCCTGCCGACCCCAGGTCCCACCACCACCGTACCCGGGACCCTCGGGACAACGGCTCCAGGTCCGGGGA
CCTCCCCTATGATGGGCGGCTACTGGAGGAGGCTGTGAGGAAGAAGGGGTCGGAGGAGAGGAGGAGACCC
CACAAGGAGGAGGAGGAAGAGGCCTACTACCCGCCCGCGCCGCCCCCGTACTCGGAGACCGACTCGCAGG
CGTCCCGAGAGCGCAGGCTCAAGAAGAACTTGGCCCTGAGTCGGGAAAGTTTAGTCGTCTGA

Translation (533 aa):
MALLAGGLSRGLGSHPAAAGRDAVVFVWLLLSTWCTAPARAIQVTVSNPYHVVILFQPVTLPCTYQMTST
PTQPIVIWKYKSFCRDRIADAFSPASVDNQLNAQLAAGNPGYNPYVECQDSVRTVRVVATKQGNAVTLGD
YYQGRRITITGNADLTFDQTAWGDSGVYYCSVVSAQDLQGNNEAYAELIVLVYAAGKAATSGVPSIYAPS
TYAHLSPAKTPPPPAMIPMGPAYNGYPGGYPGDVDRSSSAGGQGSYVPLLRDTDSSVASEVRSGYRIQAS
QQDDSMRVLYYMEKELANFDPSRPGPPSGRVERAMSEVTSLHEDDWRSRPSRGPALTPIRDEEWGGHSPR
SPRGWDQEPAREQAGGGWRARRPRARSVDALDDLTPPSTAESGSRSPTSNGGRSRAYMPPRSRSRDDLYD
QDDSRDFPRSRDPHYDDFRSRERPPADPRSHHHRTRDPRDNGSRSGDLPYDGRLLEEAVRKKGSEERRRP
HKEEEEEAYYPPAPPPYSETDSQASRERRLKKNLALSRESLVV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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