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Report for CCDS11783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11783.1 Public Homo sapiens 17 PDE6G 24 110 108 CCDS HistoryNCBI Gene:5148Re-query CCDS DB by CCDS ID:11783.1Re-query CCDS DB by GeneID:5148See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11783.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331056.10 ENSP00000328412.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331056.10Link to Ensembl Protein Viewer:ENSP00000328412.5Re-query CCDS DB by Nucleotide ID:ENST00000331056Re-query CCDS DB by Protein ID:ENSP00000328412
Original member Current member EBI ENST00000571224.5 ENSP00000458167.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571224.5Link to Ensembl Protein Viewer:ENSP00000458167.1Re-query CCDS DB by Nucleotide ID:ENST00000571224Re-query CCDS DB by Protein ID:ENSP00000458167
Original member Current member EBI ENST00000571004.1 ENSP00000461464.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571004.1Link to Ensembl Protein Viewer:ENSP00000461464.1Re-query CCDS DB by Nucleotide ID:ENST00000571004Re-query CCDS DB by Protein ID:ENSP00000461464
Original member Current member NCBI NM_001365724.1 NP_001352653.1 Accepted alive Link to Nucleotide Sequence:NM_001365724.1Link to Protein Sequence:NP_001352653.1Re-query CCDS DB by Nucleotide ID:NM_001365724Re-query CCDS DB by Protein ID:NP_001352653Link to BLAST:NP_001352653.1
Original member Current member NCBI NM_001365725.1 NP_001352654.1 Accepted alive Link to Nucleotide Sequence:NM_001365725.1Link to Protein Sequence:NP_001352654.1Re-query CCDS DB by Nucleotide ID:NM_001365725Re-query CCDS DB by Protein ID:NP_001352654Link to BLAST:NP_001352654.1
Original member Current member NCBI NM_002602.4 NP_002593.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002602.4Link to Protein Sequence:NP_002593.1Re-query CCDS DB by Nucleotide ID:NM_002602Re-query CCDS DB by Protein ID:NP_002593Link to BLAST:NP_002593.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352653.1 87 P18545 87 100% 0 0
NP_001352654.1 87 P18545 87 100% 0 0
NP_002593.1 87 P18545 87 100% 0 0

Chromosomal Locations for CCDS 11783.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81651074 81651150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81651645 81651685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81653160 81653305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGAACCTGGAACCGCCCAAGGCTGAGTTCCGGTCAGCCACCAGGGTGGCCGGGGGACCTGTCACCCCCA
GG
AAAGGGCCCCCTAAATTTAAGCAGCGACAGACCAGGCAGTTCAAGAGCAAGCCCCCAAAGAAAGGCGT
T
CAAGGGTTTGGGGACGACATCCCTGGAATGGAAGGCCTGGGAACAGACATCACAGTCATCTGCCCTTGG
GAG
GCCTTCAACCACCTGGAGCTGCACGAGCTGGCCCAATATGGCATCATCTAG


Translation (87 aa):
MNLEPPKAEFRSATRVAGGPVTPRKGPPKFKQRQTRQFKSKPPKKGVQGFGDDIPGMEGLGTDITVICPW
E
AFNHLELHELAQYGII




Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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