NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, December 17, 2024, starting at 8:00 a.m. EST for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11731.1 Public Homo sapiens 17 WBP2 24 110 108 CCDS HistoryNCBI Gene:23558Re-query CCDS DB by CCDS ID:11731.1Re-query CCDS DB by GeneID:23558See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11731.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254806.8 ENSP00000254806.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254806.8Link to Ensembl Protein Viewer:ENSP00000254806.3Re-query CCDS DB by Nucleotide ID:ENST00000254806Re-query CCDS DB by Protein ID:ENSP00000254806
Original member Current member EBI ENST00000591399.5 ENSP00000467579.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591399.5Link to Ensembl Protein Viewer:ENSP00000467579.1Re-query CCDS DB by Nucleotide ID:ENST00000591399Re-query CCDS DB by Protein ID:ENSP00000467579
Original member Current member NCBI NM_001348170.1 NP_001335099.1 Accepted alive Link to Nucleotide Sequence:NM_001348170.1Link to Protein Sequence:NP_001335099.1Re-query CCDS DB by Nucleotide ID:NM_001348170Re-query CCDS DB by Protein ID:NP_001335099Link to BLAST:NP_001335099.1
Original member Current member NCBI NM_012478.4 NP_036610.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012478.4Link to Protein Sequence:NP_036610.2Re-query CCDS DB by Nucleotide ID:NM_012478Re-query CCDS DB by Protein ID:NP_036610Link to BLAST:NP_036610.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335099.1 261 Q969T9-1 261 100% 0 0
NP_036610.2 261 Q969T9-1 261 100% 0 0

Chromosomal Locations for CCDS 11731.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 75846734 75846787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75846908 75846984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75847487 75847609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75847796 75847930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75848570 75848662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75849604 75849739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75851568 75851676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75855239 75855297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGGCGCTCAACAAGAATCACTCGGAGGGCGGCGGAGTGATCGTCAATAACACCGAGAGCATCCTAATGT
CCTATGATCACGTGGAACTCACATTCAATGACATGAAGAACGTGCCAGAAGCCTTCAAAGGGACCAAGAA
AGGCACTGTCTACCTTACCCCTTACCGGGTCATCTTTCTGTCCAAGGGCAAGGATGCCATGCAGTCCTTC
ATGATGCCATTTTATCTCATGAAAGACTGTGAGATCAAGCAGCCCGTATTTGGTGCAAACTACATCAAGG
GAACAGTGAAGGCGGAAGCGGGAGGTGGCTGGGAAGGCTCTGCTTCCTACAAGTTGACTTTCACGGCAGG
GGGCGCCATTGAGTTCGGACAGCGGATGCTCCAGGTGGCATCTCAAGCCTCCAGAGGTGAAGTCCCCAGT
GGAGCCTATGGCTACTCTTACATGCCCAGCGGGGCCTATGTCTATCCCCCGCCAGTCGCCAATGGAATGT
ACCCCTGCCCTCCTGGCTACCCCTATCCACCGCCCCCACCTGAGTTCTATCCAGGACCCCCCATGATGGA
CGGGGCCATGGGATACGTGCAGCCCCCACCACCGCCCTACCCTGGGCCCATGGAACCTCCGGTCAGCGGC
CCCGATGTCCCCTCCACTCCTGCAGCCGAAGCCAAGGCCGCAGAAGCAGCCGCCAGCGCCTATTACAACC
CAGGCAATCCTCACAACGTCTACATGCCCACGAGCCAGCCGCCGCCACCTCCCTACTACCCACCGGAAGA
TAAGAAGACCCAGTAG

Translation (261 aa):
MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFLSKGKDAMQSF
MMPFYLMKDCEIKQPVFGANYIKGTVKAEAGGGWEGSASYKLTFTAGGAIEFGQRMLQVASQASRGEVPS
GAYGYSYMPSGAYVYPPPVANGMYPCPPGYPYPPPPPEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVSG
PDVPSTPAAEAKAAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPPEDKKTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH