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Report for CCDS11726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11726.1 Public Homo sapiens 17 SAP30BP 24 110 108 CCDS HistoryNCBI Gene:29115Re-query CCDS DB by CCDS ID:11726.1Re-query CCDS DB by GeneID:29115See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11726.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000584667.6 ENSP00000462116.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000584667.6Link to Ensembl Protein Viewer:ENSP00000462116.1Re-query CCDS DB by Nucleotide ID:ENST00000584667Re-query CCDS DB by Protein ID:ENSP00000462116
Original member Current member NCBI NM_013260.8 NP_037392.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013260.8Link to Protein Sequence:NP_037392.1Re-query CCDS DB by Nucleotide ID:NM_013260Re-query CCDS DB by Protein ID:NP_037392Link to BLAST:NP_037392.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037392.1 308 Q9UHR5-1 308 100% 0 0

Chromosomal Locations for CCDS 11726.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 75667373 75667478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75668516 75668625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75671816 75671863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75693440 75693482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75699783 75699871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75702480 75702571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75703311 75703371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75703808 75703859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75704756 75704814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75706008 75706092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 75706340 75706521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGCGGGGAAGAAGAATGTTCTGTCGTCTCTCGCAGTTTACGCGGAAGATTCAGAGCCCGAGTCTGATG
GCGAGGCTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGAAAGGCGGATTGGTATCTGATGCCTATGG
GGAGGATGACTTTTCTCGTCTAGGGGGTGATGAAGATGGTTATGAAGAAGAAGAAGATGAGAACAGTAGA
CAGTCGGAAGATGACGATTCAGAGACTGAAAAACCTGAGGCTGATGACCCAAAGGATAATACAGAAGCAG
AAAAGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAAT
CAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAGACAAGATCCAGAAGCTTTATGAA
CGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAGAAAGAATTTCGGAACCCTAGCA
TCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCCAAAGGATATGTTTGA
TCCCCATGGCTGGTCTGAGGACTCCTACTATGAGGCATTAGCCAAGGCCCAGAAAATTGAGATGGACAAA
TTGGAAAAGGCCAAAAAGGAGCGAACAAAAATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCA
ACGCCACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAAAGAGCAAGTG
GGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTGCCAGCT
GTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCACCATTGTGA
AGAAGGCCAAGCAGTGA

Translation (308 aa):
MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSDAYGEDDFSRLGGDEDGYEEEEDENSR
QSEDDDSETEKPEADDPKDNTEAEKRDPQELVASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYE
RKIKEGMDMNYIIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDK
LEKAKKERTKIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTATLPA
VVTVTTSASGSKTTVISAVGTIVKKAKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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