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Report for CCDS11706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11706.1 Public Homo sapiens 17 NAT9 24 110 108 CCDS HistoryNCBI Gene:26151Re-query CCDS DB by CCDS ID:11706.1Re-query CCDS DB by GeneID:26151See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11706.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357814.8 ENSP00000350467.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357814.8Link to Ensembl Protein Viewer:ENSP00000350467.3Re-query CCDS DB by Nucleotide ID:ENST00000357814Re-query CCDS DB by Protein ID:ENSP00000350467
Original member Current member NCBI NM_001305078.2 NP_001292007.1 Accepted alive Link to Nucleotide Sequence:NM_001305078.2Link to Protein Sequence:NP_001292007.1Re-query CCDS DB by Nucleotide ID:NM_001305078Re-query CCDS DB by Protein ID:NP_001292007Link to BLAST:NP_001292007.1
Original member Current member NCBI NM_015654.5 NP_056469.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015654.5Link to Protein Sequence:NP_056469.2Re-query CCDS DB by Nucleotide ID:NM_015654Re-query CCDS DB by Protein ID:NP_056469Link to BLAST:NP_056469.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001292007.1 207 Q9BTE0-1 207 100% 0 0
NP_056469.2 207 Q9BTE0-1 207 100% 0 0

Chromosomal Locations for CCDS 11706.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74771724 74771858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74771960 74772054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74772218 74772277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74772896 74773039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74773576 74773688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74775622 74775698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGAGGTTGAATCAGAACACCTTGCTGCTGGGGAAGAAGGTGGTCCTTGTACCCTACACCTCGGAGCATG
TGCCCAGCAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGCCTCGGAGCCGCTGAC
CCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAAGTGTACCTTCATTGTGCTG
GATGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCATGGTGGGAGATGTGAACCTCT
TCCTCACAGATCTAGAAGACCTCACCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCCAGCTGCAGGGG
TAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGCTGTCTTACGGAGTGACCACGCTAGGTCTGACCAAG
TTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGAAACTTCACTTTGAGCAGG
TGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTCCGAGCATCAGTGGCT
TCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAGCCCTGCTGA

Translation (207 aa):
MRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQEDADKCTFIVL
DAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLGTEAVLAMLSYGVTTLGLTK
FEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVSESEHQWLLEQTSHVEEKPYRDGSAEPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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