NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11497.1 Public Homo sapiens 17 FMNL1 24 110 108 CCDS HistoryNCBI Gene:752Re-query CCDS DB by CCDS ID:11497.1Re-query CCDS DB by GeneID:752See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11497.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331495.8 ENSP00000329219.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331495.8Link to Ensembl Protein Viewer:ENSP00000329219.2Re-query CCDS DB by Nucleotide ID:ENST00000331495Re-query CCDS DB by Protein ID:ENSP00000329219
Original member Current member NCBI NM_005892.4 NP_005883.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005892.4Link to Protein Sequence:NP_005883.3Re-query CCDS DB by Nucleotide ID:NM_005892Re-query CCDS DB by Protein ID:NP_005883Link to BLAST:NP_005883.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005883.3 1100 O95466-1 1100 100% 0 0

Chromosomal Locations for CCDS 11497.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45222125 45222253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45230604 45230687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45232367 45232480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45233224 45233297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45233648 45233731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45234072 45234200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45236136 45236244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45237281 45237357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45237546 45237639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45238564 45238638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45238955 45239065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45240476 45240625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45241129 45241230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45241382 45241634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45241847 45242146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45242341 45242465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45243118 45243320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45243791 45244025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45244176 45244244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45244819 45244899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45244979 45245108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45245253 45245416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45245632 45245733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45245878 45245973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45246210 45246330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45246505 45246596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3303 nt):
ATGGGCAACGCGGCCGGCAGCGCCGAGCAGCCCGCGGGCCCCGCCGCGCCGCCCCCCAAGCAGCCCGCGC
CTCCCAAGCAGCCGATGCCCGCGGCCGGAGAGCTGGAGGAGAGGTTCAACCGCGCCCTGAACTGCATGAA
CTTGCCCCCAGACAAGGTCCAGCTGCTGAGCCAGTATGACAACGAGAAGAAGTGGGAGCTCATCTGTGAT
CAGGAGCGGTTTCAAGTCAAGAATCCCCCCGCAGCCTACATCCAGAAGCTGAAGAGCTATGTGGATACTG
GTGGGGTCAGCCGAAAGGTAGCAGCTGATTGGATGTCCAACCTGGGGTTTAAGAGGCGAGTTCAGGAGTC
CACGCAGGTGCTACGGGAGCTGGAGACCTCCCTGAGGACCAACCACATTGGGTGGGTGCAGGAGTTCCTC
AATGAAGAGAACCGTGGCCTGGATGTGCTGCTCGAGTACCTGGCCTTTGCCCAGTGCTCTGTCACGTATG
ACATGGAGAGCACAGACAACGGGGCTTCCAACTCAGAGAAAAACAAGCCCCTGGAGCAGTCTGTGGAAGA
CCTCAGCAAGGGTCCACCCTCCTCCGTGCCCAAAAGCCGCCACCTGACCATCAAGCTGACCCCAGCCCAC
AGCAGGAAGGCCCTGCGGAATTCCCGCATCGTCAGCCAGAAGGACGACGTCCACGTCTGTATTATGTGCC
TACGCGCCATCATGAACTACCAGTCTGGCTTCAGCCTTGTCATGAACCACCCAGCCTGTGTCAATGAGAT
TGCTCTGAGCCTCAACAACAAGAACCCCAGAACCAAGGCTCTGGTGCTGGAGCTGCTGGCGGCCGTGTGC
TTGGTGCGGGGAGGACATGACATCATCCTTGCAGCCTTTGACAACTTCAAGGAGGTGTGTGGGGAGCAGC
ACCGCTTTGAAAAGCTGATGGAATATTTCCGGAATGAGGACAGCAACATCGACTTCATGGTGGCCTGCAT
GCAGTTCATCAACATTGTGGTACATTCGGTGGAGAACATGAACTTCCGTGTCTTCCTGCAATATGAGTTC
ACCCACTTGGGCCTGGACCTGTACTTGGAGAGGCTTCGGCTCACCGAGAGTGACAAGCTGCAGGTGCAGA
TCCAGGCGTACCTGGACAATATTTTTGATGTGGGGGCGCTGCTGGAGGACACAGAGACCAAGAACGCTGT
GCTGGAGCACATGGAGGAACTGCAGGAGCAAGTGGCGCTGCTGACAGAGCGGCTTCGGGACGCGGAGAAC
GAATCCATGGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGCAAGGAGTTGGAGACCCTGC
GGGAGCGCTTCAGCGAATCGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGCCTGAGAAAGCGCCTCC
CGCTGCCCCGACGCGGCCCTCGGCCCTGGAGCTGAAGGTGGAGGAGCTGGAGGAGAAGGGGTTAATCCGT
ATTCTGCGGGGGCCGGGGGATGCTGTCTCCATCGAGATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCG
GTGATGCTCCGACTCCGGGGGTGCCGACCGGCTCCCCCAGCCCAGATCTCGCACCTGCAGCAGAGCCGGC
TCCCGGAGCAGCGCCACCGCCGCCGCCCCCACTGCCCGGCCTCCCCTCCCCGCAGGAAGCCCCGCCCTCT
GCGCCCCCACAGGCCCCGCCTCTCCCTGGCAGCCCGGAGCCCCCGCCTGCGCCGCCGCTGCCCGGAGACC
TGCCGCCCCCACCCCCGCCACCGCCACCACCTCCGGGCACTGACGGGCCGGTGCCTCCGCCGCCGCCGCC
GCCGCCGCCGCCTCCCGGAGGTCCTCCTGATGCCCTAGGAAGACGCGACTCAGAATTGGGCCCAGGAGTG
AAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAATGCCACTCTTGAACTGGGTGGCACTGAAACCCAGCC
AGATCACCGGCACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCTGCAGGAGCTAGACATGAGTGATTT
TGAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAGCCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCC
CAGAAGGCCCCCAGCAAGGCGACACTCATTGAGGCCAACCGGGCCAAGAACTTGGCCATCACCCTGCGGA
AGGGCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTGAGGCGTACGACCTGCAGGCTCTGGGCCTGGA
CTTCCTGGAGCTGCTGATGCGCTTCCTGCCCACAGAGTATGAGCGCAGCCTCATCACCCGCTTTGAGCGG
GAGCAGCGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTCATGCTATGCTTCAGCCGCATCCCGCGCC
TGCCGGAGCGCATGACCACACTCACCTTCCTGGGCAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCA
ACTGAATGCCATCATTGCAGCCTCAATGTCCATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATT
GTCCTGGCCTTTGGCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCTATGGCTTCCGGCTCCAGAGCC
TGGATGCGCTGTTGGAGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCACTACCTGGTGAAGGTCAT
TGCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGTG
TCCCTGGACAGTGTCCTGGCGGACGTGCGCTCCCTGCAGCGAGGCCTAGAGTTGACACAGAGAGAGTTTG
TGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGGGCCAACTCGCCCACCATGGACAAGCTGCT
GGCAGACAGCAAGACGGCTCAGGAGGCCTTTGAGTCTGTGGTGGAGTACTTCGGAGAGAACCCCAAGACC
ACATCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAGG
TGGAACAGTGGAAAAAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCCCC
AGCACCCAAGTCACCGCCAAAGGCCCGGCGGCCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAG
CAGAAGGAGCCACTCATTTATGAGAGCGACCGTGATGGGGCCATTGAAGACATCATCACAGTGATCAAGA
CGGTGCCCTTCACGGCCCGCACCGGCAAGCGGACATCCCGGCTCCTCTGTGAGGCCAGCCTGGGAGAAGA
GATGCCCCTCTAG

Translation (1100 aa):
MGNAAGSAEQPAGPAAPPPKQPAPPKQPMPAAGELEERFNRALNCMNLPPDKVQLLSQYDNEKKWELICD
QERFQVKNPPAAYIQKLKSYVDTGGVSRKVAADWMSNLGFKRRVQESTQVLRELETSLRTNHIGWVQEFL
NEENRGLDVLLEYLAFAQCSVTYDMESTDNGASNSEKNKPLEQSVEDLSKGPPSSVPKSRHLTIKLTPAH
SRKALRNSRIVSQKDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEIALSLNNKNPRTKALVLELLAAVC
LVRGGHDIILAAFDNFKEVCGEQHRFEKLMEYFRNEDSNIDFMVACMQFINIVVHSVENMNFRVFLQYEF
THLGLDLYLERLRLTESDKLQVQIQAYLDNIFDVGALLEDTETKNAVLEHMEELQEQVALLTERLRDAEN
ESMAKIAELEKQLSQARKELETLRERFSESTAMGPSRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIR
ILRGPGDAVSIEILPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPS
APPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALGRRDSELGPGV
KAKKPIQTKFRMPLLNWVALKPSQITGTVFTELNDEKVLQELDMSDFEEQFKTKSQGPSLDLSALKSKAA
QKAPSKATLIEANRAKNLAITLRKGNLGAERICQAIEAYDLQALGLDFLELLMRFLPTEYERSLITRFER
EQRPMEELSEEDRFMLCFSRIPRLPERMTTLTFLGNFPDTAQLLMPQLNAIIAASMSIKSSDKLRQILEI
VLAFGNYMNSSKRGAAYGFRLQSLDALLEMKSTDRKQTLLHYLVKVIAEKYPQLTGFHSDLHFLDKAGSV
SLDSVLADVRSLQRGLELTQREFVRQDDCMVLKEFLRANSPTMDKLLADSKTAQEAFESVVEYFGENPKT
TSPGLFFSLFSRFIKAYKKAEQEVEQWKKEAAAQEAGADTPGKGEPPAPKSPPKARRPQMDLISELKRRQ
QKEPLIYESDRDGAIEDIITVIKTVPFTARTGKRTSRLLCEASLGEEMPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH