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Report for CCDS11389.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11389.1 Public Homo sapiens 17 KRT33B 24 110 108 CCDS HistoryNCBI Gene:3884Re-query CCDS DB by CCDS ID:11389.1Re-query CCDS DB by GeneID:3884See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11389.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251646.8 ENSP00000251646.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251646.8Link to Ensembl Protein Viewer:ENSP00000251646.3Re-query CCDS DB by Nucleotide ID:ENST00000251646Re-query CCDS DB by Protein ID:ENSP00000251646
Original member Current member NCBI NM_002279.5 NP_002270.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002279.5Link to Protein Sequence:NP_002270.1Re-query CCDS DB by Nucleotide ID:NM_002279Re-query CCDS DB by Protein ID:NP_002270Link to BLAST:NP_002270.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002270.1 404 Q14525 404 100% 0 0

Chromosomal Locations for CCDS 11389.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41363836 41363953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41364779 41364999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41365175 41365300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41365392 41365553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41366470 41366626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41367908 41367990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41369403 41369750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1215 nt):
ATGCCCTACAACTTCTGCCTGCCCAGCCTGAGCTGCCGCACCAGCTGCTCCTCCCGGCCCTGTGTGCCCC
CCAGCTGCCACGGCTACACCCTGCCCGGGGCCTGCAACATCCCTGCCAATGTGAGCAACTGCAACTGGTT
CTGCGAGGGCTCCTTCAATGGCAGCGAGAAGGAGACTATGCAGTTCCTGAACGACCGCCTGGCCAGCTAC
CTGGAGAAGGTGCGTCAGCTGGAGCGGGACAACGCGGAGCTGGAGAACCTCATCCGGGAGCGGTCTCAGC
AGCAGGAGCCCTTGCTGTGCCCCAGCTACCAGTCCTACTTCAAGACCATTGAGGAGCTCCAGCAGAAGAT
CCTGTGCAGCAAGTCTGAGAATGCCAGGCTGGTGGTGCAGATCGACAATGCCAAGCTGGCTGCAGATGAC
TTCAGAACCAAGTACCAGACGGAGCAGTCCCTGCGGCAGCTGGTGGAGTCCGACATCAACAGCCTGCGCA
GGATTCTGGATGAGCTGACCCTGTGCAGGTCTGACCTGGAGGCCCAGATGGAGTCCCTGAAGGAGGAGCT
GCTGTCCCTCAAGCAGAACCATGAGCAGGAAGTCAACACCTTGCGCTGCCAGCTTGGAGACCGCCTCAAC
GTGGAGGTGGACGCTGCTCCCGCTGTGGACCTGAACCAGGTCCTGAACGAGACCAGGAATCAGTATGAGG
CCCTGGTGGAAACCAACCGCAGGGAAGTGGAGCAATGGTTCGCCACGCAGACCGAGGAGCTGAACAAGCA
GGTGGTATCCAGCTCGGAGCAGCTGCAGTCCTACCAGGCGGAGATCATCGAGCTGAGACGCACAGTCAAT
GCCCTGGAGATCGAGCTGCAGGCCCAGCACAACCTGCGATACTCTCTGGAAAACACGCTGACAGAGAGCG
AGGCCCGCTACAGCTCCCAGCTGTCCCAGGTGCAGAGCCTGATCACCAACGTGGAGTCCCAGCTGGCGGA
GATCCGCAGTGACCTGGAGCGGCAGAACCAGGAGTATCAGGTGCTGCTGGACGTGCGGGCGCGGCTGGAG
TGTGAGATCAACACATACCGGAGCCTGCTGGAGAGCGAGGACTGCAAGCTGCCCTCCAACCCCTGCGCCA
CCACCAATGCATGTGAAAAGCCCATTGGATCCTGTGTCACCAATCCTTGTGGTCCTCGTTCCCGCTGTGG
GCCTTGCAACACCTTTGGGTACTAG

Translation (404 aa):
MPYNFCLPSLSCRTSCSSRPCVPPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLNDRLASY
LEKVRQLERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCSKSENARLVVQIDNAKLAADD
FRTKYQTEQSLRQLVESDINSLRRILDELTLCRSDLEAQMESLKEELLSLKQNHEQEVNTLRCQLGDRLN
VEVDAAPAVDLNQVLNETRNQYEALVETNRREVEQWFATQTEELNKQVVSSSEQLQSYQAEIIELRRTVN
ALEIELQAQHNLRYSLENTLTESEARYSSQLSQVQSLITNVESQLAEIRSDLERQNQEYQVLLDVRARLE
CEINTYRSLLESEDCKLPSNPCATTNACEKPIGSCVTNPCGPRSRCGPCNTFGY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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