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Report for CCDS11064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11064.1 Public Homo sapiens 17 INCA1 24 110 108 CCDS HistoryNCBI Gene:388324Re-query CCDS DB by CCDS ID:11064.1Re-query CCDS DB by GeneID:388324See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11064.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355025.7 ENSP00000347129.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355025.7Link to Ensembl Protein Viewer:ENSP00000347129.3Re-query CCDS DB by Nucleotide ID:ENST00000355025Re-query CCDS DB by Protein ID:ENSP00000347129
Original member Current member EBI ENST00000575780.5 ENSP00000461844.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575780.5Link to Ensembl Protein Viewer:ENSP00000461844.1Re-query CCDS DB by Nucleotide ID:ENST00000575780Re-query CCDS DB by Protein ID:ENSP00000461844
Original member Current member NCBI NM_001167985.2 NP_001161457.1 Accepted alive Link to Nucleotide Sequence:NM_001167985.2Link to Protein Sequence:NP_001161457.1Re-query CCDS DB by Nucleotide ID:NM_001167985Re-query CCDS DB by Protein ID:NP_001161457Link to BLAST:NP_001161457.1
Original member Current member NCBI NM_001394790.1 NP_001381719.1 Accepted alive Link to Nucleotide Sequence:NM_001394790.1Link to Protein Sequence:NP_001381719.1Re-query CCDS DB by Nucleotide ID:NM_001394790Re-query CCDS DB by Protein ID:NP_001381719Link to BLAST:NP_001381719.1
Original member Current member NCBI NM_001394791.1 NP_001381720.1 Accepted alive Link to Nucleotide Sequence:NM_001394791.1Link to Protein Sequence:NP_001381720.1Re-query CCDS DB by Nucleotide ID:NM_001394791Re-query CCDS DB by Protein ID:NP_001381720Link to BLAST:NP_001381720.1
Original member Current member NCBI NM_213726.3 NP_998891.2 Accepted alive Link to Nucleotide Sequence:NM_213726.3Link to Protein Sequence:NP_998891.2Re-query CCDS DB by Nucleotide ID:NM_213726Re-query CCDS DB by Protein ID:NP_998891Link to BLAST:NP_998891.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161457.1 221 Q0VD86-2 221 100% 0 0
NP_001381719.1 221 Q0VD86-2 221 100% 0 0
NP_001381720.1 221 Q0VD86-2 221 100% 0 0
NP_998891.2 221 Q0VD86-2 221 100% 0 0

Chromosomal Locations for CCDS 11064.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4988405 4988554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4988779 4988944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4989428 4989579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4989890 4989929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4990152 4990265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4994394 4994437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGCAGGTGCAGGATGATGGAGTCAACCTCATCCCCTTTGCCAAGTGTTCCAGGGTGGTCAGCCGATCTC
CACCCCCAAGGTTGCCTTCCCAGAGCCTCAGACCCATGCCCCAGCGTTATGGAGATGTCTTCTGGAAGAA
CCTTAATCAAAGGCCCACCCCCACTTGGCTGGAGGAGCAGCACATTCCACCCATGCTGCTCCCACCCCCT
GAAATGCTTTGGAGAAGAAAGAAGAGGAGGCCATGTTTGGAAGGAATGCAGCAGCAGGGCCTTGGGGGAG
TCCCCGCCCGGGTGAGGGCTGTCACTTACCACCTGGAGGACCTAAGAAGGCGTCAGAGCATCATCAACGA
ACTGAAGAAGGCCCAGTGGGGCAGCTCTGGGGCTGCATCTGAGCCAGTGGTGCTTGGCGAAGAGGGCTGT
GGATTCCCCAGCACCAATGAATACCCTGATCTGGAAGAGGAGAGAGCAACCTATCCACAGGAAGAGGACC
GTTTTCTCACTCCTGGCAGGGCCCAGCTGCTTTGGTCTCCCTGGAGCCCCCTGGATCAGGAGGAGGCTTG
TGCCTCCAGGCAGCTGCACTCTCTGGCCTCGTTCAGCACTGTCACAGCCAGAAGGAACCCCCTTCACAAT
CCCTGGGGGATGGAGTTGGCAGCGTCTGAAGAGTAA

Translation (221 aa):
MQVQDDGVNLIPFAKCSRVVSRSPPPRLPSQSLRPMPQRYGDVFWKNLNQRPTPTWLEEQHIPPMLLPPP
EMLWRRKKRRPCLEGMQQQGLGGVPARVRAVTYHLEDLRRRQSIINELKKAQWGSSGAASEPVVLGEEGC
GFPSTNEYPDLEEERATYPQEEDRFLTPGRAQLLWSPWSPLDQEEACASRQLHSLASFSTVTARRNPLHN
PWGMELAASEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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