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Report for CCDS1083.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1083.1 Public Homo sapiens 1 DCST1 24 110 108 CCDS HistoryNCBI Gene:149095Re-query CCDS DB by CCDS ID:1083.1Re-query CCDS DB by GeneID:149095See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1083.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295542.6 ENSP00000295542.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295542.6Link to Ensembl Protein Viewer:ENSP00000295542.2Re-query CCDS DB by Nucleotide ID:ENST00000295542Re-query CCDS DB by Protein ID:ENSP00000295542
Original member Current member NCBI NM_152494.4 NP_689707.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152494.4Link to Protein Sequence:NP_689707.2Re-query CCDS DB by Nucleotide ID:NM_152494Re-query CCDS DB by Protein ID:NP_689707Link to BLAST:NP_689707.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689707.2 706 Q5T197-1 706 100% 0 0

Chromosomal Locations for CCDS 1083.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 155034037 155034097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155034435 155034560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155034653 155034727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155039403 155039531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155040485 155040624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155041397 155041613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155041714 155041857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155042735 155042856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155043352 155043509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155045893 155045992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155046125 155046220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155046360 155046486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155047196 155047312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155047787 155047929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155048057 155048170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155050617 155050868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2121 nt):
ATGGACATTAAACATCATCAGAATGGCACAAGAGGGCAAAGAAGAAAACAGCCTCATACCACGGTGCAGA
GGCTCCTGACCTGGGGGCTGCCAGTCTCCTGTAGCTGGTTCCTGTGGCGCCAGCCGGGCGAGTTTCCTGT
CACTGCTCTCCTGCTGGGGGCAGGCGCTGGGGGGCTCCTGGCCATAGGTCTCTTTCAGCTCCTGGTGAAC
CCCATGAACATCTACGAAGAACAGAAGATTATGTTCTTGTACAGCTTGGTGGGCTTGGGGGCCATGGGCT
GGGGGACCTCCCCTCACATCCGCTGTGCCAGCCTCCTACTAGTACCCAAGATGCTGGGCAAGGAAGGCAG
GCTCTTTGTCCTGGGATACGCCTTGGCTGCCATCTATGTGGGGCCAGTAGCCAATCTGCGACACAATCTC
AACAACGTGATCGCATCGCTGGGCTGCACCGTGGAGCTGCAGATCAACAACACCCGCGCAGCTTGGCGCA
TCTCCACAGCCCCCTTACGGGCCATGTTCAAGGACCTGCTGAGTAGCAAAGAATTGCTGAGAGCAGAGAC
TCGGAACATCTCCGCCACTTTTGAGGACCTGGATGCCCAGGTGAATAGTGAGACGGGCTACACGCCTGAG
GATACCATGGACTCAGGGGAGACAGCCCAGGGCAGGGAGGCCCGCCAAGCCCCAGCCTCCAGACTCCACC
TGTCGACACAGAAGATGTATGAGCTGAAGACCAAGCTGCGTTGCTCCTATGTGGTGAACCAGGCCATACT
CAGCTGCCGTCGTTGGTTTGACCGCAAGCATGAACAGTGCATGAAGCACATCTGGGTCCCACTCCTCACC
CACCTGCTCTGCCTGCCTATGAAGTTCAAGTTCTTCTGTGGCATTGCCAAGGTGATGGAGGTTTGGTGCC
GCAATCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCTACGACTCCCTCAACCAGTCTATTCGTGGCCT
GGATGGGGAATTTTCAGCCAATATTGACTTCAAGGAAGAGAAGCAGGCTGGGGTGCTGGGGCTCAACACA
AGCTGGGAGCGCGTGAGCACCGAGGTGCGGGACTACGTGTACCGCCAGGAGGCCCGGCTGGAGTGGGCCC
TGGGGCTGCTGCACGTGCTGCTCTCCTGCACTTTCCTGCTGGTCCTGCATGCGTCTTTCTCCTACATGGA
CAGCTATAACCATGACATTCGTTTTGACAACATCTACATCAGTACCTACTTCTGCCAGATCGATGACCGC
AGGAAGAAGCTGGGCAAACGGACTCTGCTGCCACTCCGCAAAGCTGAGGAGAAAACCGTCATCTTCCCTT
GCAAGCCCACCATCCAGGCCTCAGAAATGAGCAATGTGGTGAGGGAGCTCCTGGAGACACTGCCCATTCT
GCTGCTGCTGGTGGTGCTGTGTGGCTTGGACTGGGCTCTCTACTCCATCTTCGACACCATCCGCCACCAC
TCCTTCCTGCAGTACTCCTTCCGCAGCAGTCATAAACTGGAGGTGAAGGTCGGGGGAGACTCCATGCTAG
CCCGGCTTCTTCGAAAAACCATTGGGGCCCTGAACACCTCCTCAGAGACAGTGATGGAATCAAACAACAT
GCCCTGCCTGCCCCAGCCTGTGGGCCTGGATGCCAGGGCCTACTGGAGAGCTGCAGTACCGATTGGCCTG
TTAGTGTGTCTCTGCCTGTTACAGGCTTTTGGCTACCGACTCCGGAGGGTCATCGCAGCCTTCTACTTCC
CCAAGCGAGAGAAGAAGCGGATCCTGTTCCTCTACAATGACCTATTGAAGAAAAGAGCAGCCTTCACCAA
ACTCAGGAGGGCCGCTATCCTGAGGCGGGAGCGACAGCAGAAGGCTCCGCGCCACCCGCTGGCGGATATC
CTGCACCGCGGCTGCCCGCTCCTGCGCCGCTGGCTGTGCCGGCGCTGCGTGGTGTGCCAGGCACCCGAGA
CGCCCGAGTCCTACGTGTGCCGGACGCTGGACTGCGAGGCCGTGTACTGCTGGTCGTGCTGGGACGACAT
GCGGCAGCGGTGCCCGGTCTGCACGCCCCGCGAAGAGCTCTCTTCCTCCGCCTTTAGTGACAGCAACGAC
GACACTGCCTACGCGGGGTGA

Translation (706 aa):
MDIKHHQNGTRGQRRKQPHTTVQRLLTWGLPVSCSWFLWRQPGEFPVTALLLGAGAGGLLAIGLFQLLVN
PMNIYEEQKIMFLYSLVGLGAMGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYVGPVANLRHNL
NNVIASLGCTVELQINNTRAAWRISTAPLRAMFKDLLSSKELLRAETRNISATFEDLDAQVNSETGYTPE
DTMDSGETAQGREARQAPASRLHLSTQKMYELKTKLRCSYVVNQAILSCRRWFDRKHEQCMKHIWVPLLT
HLLCLPMKFKFFCGIAKVMEVWCRNRIPVEGNFGQTYDSLNQSIRGLDGEFSANIDFKEEKQAGVLGLNT
SWERVSTEVRDYVYRQEARLEWALGLLHVLLSCTFLLVLHASFSYMDSYNHDIRFDNIYISTYFCQIDDR
RKKLGKRTLLPLRKAEEKTVIFPCKPTIQASEMSNVVRELLETLPILLLLVVLCGLDWALYSIFDTIRHH
SFLQYSFRSSHKLEVKVGGDSMLARLLRKTIGALNTSSETVMESNNMPCLPQPVGLDARAYWRAAVPIGL
LVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNDLLKKRAAFTKLRRAAILRRERQQKAPRHPLADI
LHRGCPLLRRWLCRRCVVCQAPETPESYVCRTLDCEAVYCWSCWDDMRQRCPVCTPREELSSSAFSDSND
DTAYAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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