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Report for CCDS10736.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10736.1 Public Homo sapiens 16 CBLN1 24 110 108 CCDS HistoryNCBI Gene:869Re-query CCDS DB by CCDS ID:10736.1Re-query CCDS DB by GeneID:869See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10736.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219197.11 ENSP00000219197.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000219197.11Link to Ensembl Protein Viewer:ENSP00000219197.5Re-query CCDS DB by Nucleotide ID:ENST00000219197Re-query CCDS DB by Protein ID:ENSP00000219197
Original member Current member EBI ENST00000536749.1 ENSP00000444651.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536749.1Link to Ensembl Protein Viewer:ENSP00000444651.1Re-query CCDS DB by Nucleotide ID:ENST00000536749Re-query CCDS DB by Protein ID:ENSP00000444651
Original member Current member NCBI NM_004352.4 NP_004343.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004352.4Link to Protein Sequence:NP_004343.1Re-query CCDS DB by Nucleotide ID:NM_004352Re-query CCDS DB by Protein ID:NP_004343Link to BLAST:NP_004343.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004343.1 193 P23435 193 100% 0 0

Chromosomal Locations for CCDS 10736.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 49279404 49279601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49280923 49281042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49281202 49281465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGCTGGGCGTCCTGGAGCTGCTGCTGCTGGGGGCTGCGTGGCTGGCGGGCCCGGCCCGCGGGCAGAATG
AGACGGAGCCCATCGTGCTGGAGGGCAAGTGCCTGGTGGTGTGCGACTCCAACCCCACGTCCGACCCCAC
GGGCACTGCCCTGGGCATCTCTGTGCGCTCTGGCAGCGCCAAGGTGGCTTTCTCTGCCATCAGGAGCACC
AACCACGAGCCGTCCGAGATGAGTAATCGCACCATGATCATCTACTTCGACCAGGTACTAGTGAACATTG
GGAACAACTTTGATTCAGAACGCAGCACTTTCATCGCCCCGCGCAAAGGGATCTACAGTTTTAACTTCCA
CGTGGTAAAAGTCTACAACAGACAAACCATACAGGTGAGCCTCATGCTAAACGGGTGGCCGGTGATTTCA
GCCTTCGCTGGTGACCAGGACGTGACCCGGGAGGCCGCCAGCAACGGAGTCCTAATCCAAATGGAGAAAG
GCGACCGAGCATACCTCAAGCTGGAGCGGGGAAACTTGATGGGGGGCTGGAAGTACTCGACCTTCTCCGG
ATTCCTGGTGTTTCCTCTCTGA

Translation (193 aa):
MLGVLELLLLGAAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTALGISVRSGSAKVAFSAIRST
NHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVIS
AFAGDQDVTREAASNGVLIQMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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