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Report for CCDS10661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10661.1 Public Homo sapiens 16 KCTD13 24 110 108 CCDS HistoryNCBI Gene:253980Re-query CCDS DB by CCDS ID:10661.1Re-query CCDS DB by GeneID:253980See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308768.9 ENSP00000311202.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000308768.9Link to Ensembl Protein Viewer:ENSP00000311202.5Re-query CCDS DB by Nucleotide ID:ENST00000308768Re-query CCDS DB by Protein ID:ENSP00000311202
Original member Current member EBI ENST00000568000.6 ENSP00000455785.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000568000.6Link to Ensembl Protein Viewer:ENSP00000455785.1Re-query CCDS DB by Nucleotide ID:ENST00000568000Re-query CCDS DB by Protein ID:ENSP00000455785
Original member Current member NCBI NM_178863.5 NP_849194.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178863.5Link to Protein Sequence:NP_849194.1Re-query CCDS DB by Nucleotide ID:NM_178863Re-query CCDS DB by Protein ID:NP_849194Link to BLAST:NP_849194.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_849194.1 329 Q8WZ19 329 100% 0 0

Chromosomal Locations for CCDS 10661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 29906872 29907108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29910978 29911173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29911815 29911867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29911960 29912049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29923190 29923359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29925790 29926033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGTCGGCGGAGGCCTCGGGCCCGGCTGCCGCCGCGGCCCCGTCCCTGGAAGCCCCCAAGCCCTCGGGTC
TCGAGCCTGGCCCCGCCGCCTACGGTCTCAAGCCGCTGACCCCGAACAGCAAATACGTGAAGCTGAACGT
GGGCGGCTCGTTGCACTACACCACGCTGCGCACCCTCACGGGACAGGACACCATGCTCAAAGCCATGTTC
AGCGGCCGCGTGGAGGTGCTGACCGATGCCGGAGGTTGGGTGCTGATTGACCGGAGCGGCCGTCACTTTG
GTACAATCCTCAATTACCTGCGGGATGGGTCTGTGCCACTGCCGGAGAGTACGAGAGAACTGGGGGAGCT
GCTGGGCGAAGCACGCTACTACCTGGTGCAGGGCCTGATTGAGGACTGCCAGCTGGCGCTGCAGCAAAAA
AGGGAGACGCTGTCCCCGCTGTGCCTCATCCCCATGGTGACATCTCCCCGGGAGGAGCAGCAGCTCCTGG
CCAGCACCTCCAAGCCCGTGGTGAAGCTCCTGCACAACCGCAGTAACAACAAGTACTCCTACACCAGCAC
TTCAGATGACAACCTACTTAAGAACATCGAGCTGTTCGACAAGCTGGCCCTGCGCTTCCACGGGCGGCTA
CTCTTCCTCAAGGATGTCCTGGGGGACGAGATCTGCTGCTGGTCTTTCTACGGGCAGGGCCGCAAAATCG
CCGAGGTGTGCTGCACCTCCATTGTCTATGCTACGGAGAAGAAGCAGACCAAGGTGGAATTTCCAGAGGC
CCGGATCTTCGAGGAGACCCTGAACATCCTCATCTACGAGACTCCCCGGGGCCCAGACCCAGCCCTCCTG
GAGGCCACAGGGGGAGCAGCTGGAGCTGGTGGGGCTGGCCGCGGGGAGGATGAAGAGAACCGAGAGCACC
GTGTCCGCAGGATCCATGTCCGGCGCCATATCACCCACGACGAGCGTCCTCATGGCCAACAAATTGTCTT
CAAGGACTGA

Translation (329 aa):
MSAEASGPAAAAAPSLEAPKPSGLEPGPAAYGLKPLTPNSKYVKLNVGGSLHYTTLRTLTGQDTMLKAMF
SGRVEVLTDAGGWVLIDRSGRHFGTILNYLRDGSVPLPESTRELGELLGEARYYLVQGLIEDCQLALQQK
RETLSPLCLIPMVTSPREEQQLLASTSKPVVKLLHNRSNNKYSYTSTSDDNLLKNIELFDKLALRFHGRL
LFLKDVLGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQTKVEFPEARIFEETLNILIYETPRGPDPALL
EATGGAAGAGGAGRGEDEENREHRVRRIHVRRHITHDERPHGQQIVFKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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