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Report for CCDS21202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21202.1 Public Mus musculus 7 Klk1 23 108 98 CCDS HistoryNCBI Gene:16612Re-query CCDS DB by CCDS ID:21202.1Re-query CCDS DB by GeneID:16612See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21202.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075162.4 ENSMUSP00000074659.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075162.4Link to Ensembl Protein Viewer:ENSMUSP00000074659.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000075162Re-query CCDS DB by Protein ID:ENSMUSP00000074659
Original member Current member NCBI NM_010639.8 NP_034769.4 Accepted alive Link to Nucleotide Sequence:NM_010639.8Link to Protein Sequence:NP_034769.4Re-query CCDS DB by Nucleotide ID:NM_010639Re-query CCDS DB by Protein ID:NP_034769Link to BLAST:NP_034769.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034769.4 261 P15947 261 100% 0 0

Chromosomal Locations for CCDS 21202.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44225479 44225524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44227521 44227680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44228528 44228814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44228911 44229047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44229414 44229569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGAGGTTCCTGATCCTGTTCCTAGCCCTGTCCCTAGGAGGGATTGATGCTGCACCTCCTGTCCAGTCTC
GAATTGTTGGAGGATTTAACTGTGAGAAGAATTCCCAGCCCTGGCAAGTGGCTGTGTACCGCTTCACCAA
ATATCAATGTGGGGGTATCCTGCTGAACGCCAACTGGGTTCTCACAGCTGCCCACTGCCATAATGACAAG
TACCAGGTGTGGCTGGGCAAAAACAACTTTTTGGAGGATGAACCCTCTGCCCAACACCGGCTTGTCAGCA
AAGCCATCCCTCACCCTGACTTCAACATGAGCCTCCTGAATGAGCACACCCCACAACCTGAGGATGACTA
CAGCAATGACCTGATGCTGCTCCGCCTCAAAAAGCCTGCTGACATCACAGATGTTGTGAAGCCCATCGAC
CTGCCCACTGAGGAGCCCAAGCTGGGGAGCACATGCCTAGCCTCAGGCTGGGGCAGCATTACACCCGTCA
AATATGAATACCCAGATGAGCTCCAGTGTGTGAACCTCAAGCTCCTGCCTAATGAGGACTGTGCCAAAGC
CCACATAGAGAAGGTGACAGATGACATGTTGTGTGCAGGAGATATGGATGGAGGCAAAGACACTTGTGCG
GGTGACTCAGGAGGCCCACTGATCTGTGATGGTGTTCTCCAAGGTATCACATCATGGGGCCCTAGCCCTT
GCGGTAAACCCAATGTGCCGGGTATCTACACCAGAGTTTTAAATTTCAACACCTGGATAAGAGAAACTAT
GGCTGAAAATGACTGA

Translation (261 aa):
MRFLILFLALSLGGIDAAPPVQSRIVGGFNCEKNSQPWQVAVYRFTKYQCGGILLNANWVLTAAHCHNDK
YQVWLGKNNFLEDEPSAQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLKKPADITDVVKPID
LPTEEPKLGSTCLASGWGSITPVKYEYPDELQCVNLKLLPNEDCAKAHIEKVTDDMLCAGDMDGGKDTCA
GDSGGPLICDGVLQGITSWGPSPCGKPNVPGIYTRVLNFNTWIRETMAEND


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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