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Report for CCDS3546.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3546.1 Public Homo sapiens 4 UTP3 24 110 108 CCDS HistoryNCBI Gene:57050Re-query CCDS DB by CCDS ID:3546.1Re-query CCDS DB by GeneID:57050See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3546.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254803.4 ENSP00000254803.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254803.4Link to Ensembl Protein Viewer:ENSP00000254803.2Re-query CCDS DB by Nucleotide ID:ENST00000254803Re-query CCDS DB by Protein ID:ENSP00000254803
Original member Current member NCBI NM_020368.3 NP_065101.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020368.3Link to Protein Sequence:NP_065101.1Re-query CCDS DB by Nucleotide ID:NM_020368Re-query CCDS DB by Protein ID:NP_065101Link to BLAST:NP_065101.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065101.1 479 Q9NQZ2 479 100% 0 0

Chromosomal Locations for CCDS 3546.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 70688678 70690117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGGTGGGGAGATCCCGGCGGCGCGGAGCAGCTAAGTGGGCAGCTGTGCGAGCCAAGGCAGGTCCCACGC
TCACCGACGAAAATGGAGATGATTTAGGATTGCCACCCTCACCAGGGGACACCAGCTACTACCAAGATCA
GGTAGATGACTTTCATGAGGCACGATCCCGGGCCGCCTTAGCTAAGGGCTGGAATGAAGTACAGAGTGGA
GACGAGGAGGATGGCGAGGAGGAGGAGGAGGAGGTGCTAGCCCTAGATATGGACGATGAGGACGACGAAG
ATGGAGGGAATGCGGGGGAGGAGGAGGAGGAGGAGAATGCCGATGATGATGGTGGGAGCTCCGTGCAAAG
TGAAGCTGAGGCCTCTGTGGATCCCAGTTTGTCGTGGGGTCAGAGGAAAAAACTTTACTATGACACGGAC
TATGGTTCCAAGTCCCGAGGCCGGCAGAGTCAACAGGAGGCAGAGGAGGAGGAAAGAGAGGAGGAGGAGG
AGGCACAGATCATTCAGCGGCGCCTAGCCCAAGCGCTGCAAGAGGATGATTTTGGTGTCGCCTGGGTTGA
GGCCTTTGCAAAACCAGTGCCTCAGGTAGATGAGGCTGAGACACGGGTCGTGAAGGATTTGGCTAAAGTT
TCAGTGAAAGAGAAGCTGAAAATGTTGCGAAAGGAATCACCAGAACTCTTGGAGCTGATAGAAGACCTGA
AAGTCAAGTTGACAGAGGTTAAGGATGAGCTGGAGCCATTGTTAGAGTTGGTGGAACAAGGGATCATTCC
ACCCGGAAAAGGAAGCCAATACTTGAGGACCAAGTACAACCTCTACTTGAATTATTGCTCGAACATCAGT
TTTTATTTGATCCTGAAAGCTAGGAGAGTCCCAGCACATGGACATCCTGTCATAGAAAGGCTTGTTACCT
ACCGAAATTTGATCAACAAGCTGTCCGTTGTGGATCAGAAGCTGTCCTCAGAAATTCGTCATCTGTTGAC
ACTTAAGGATGATGCTGTAAAGAAAGAACTGATTCCAAAAGCAAAATCCACCAAGCCCAAACCAAAGTCT
GTTTCAAAGACTTCTGCTGCTGCCTGTGCTGTTACAGATCTTTCTGATGATTCTGATTTTGATGAAAAAG
CAAAACTGAAGTACTATAAAGAAATAGAAGACAGGCAAAAGCTAAAGAGAAAGAAAGAAGAAAATAGCAC
TGAAGAACAGGCTCTTGAAGATCAAAATGCAAAGAGAGCTATTACCTATCAAATTGCTAAAAATAGGGGA
CTTACTCCTAGGAGAAAGAAGATTGATCGCAATCCCAGAGTGAAACACAGAGAGAAGTTCAGAAGAGCCA
AAATTAGAAGAAGAGGCCAGGTTCGTGAAGTTCGTAAAGAAGAGCAACGTTATAGTGGTGAATTATCTGG
CATTCGTGCAGGAGTTAAAAAGAGCATTAAGCTTAAATGA

Translation (479 aa):
MVGRSRRRGAAKWAAVRAKAGPTLTDENGDDLGLPPSPGDTSYYQDQVDDFHEARSRAALAKGWNEVQSG
DEEDGEEEEEEVLALDMDDEDDEDGGNAGEEEEEENADDDGGSSVQSEAEASVDPSLSWGQRKKLYYDTD
YGSKSRGRQSQQEAEEEEREEEEEAQIIQRRLAQALQEDDFGVAWVEAFAKPVPQVDEAETRVVKDLAKV
SVKEKLKMLRKESPELLELIEDLKVKLTEVKDELEPLLELVEQGIIPPGKGSQYLRTKYNLYLNYCSNIS
FYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLLTLKDDAVKKELIPKAKSTKPKPKS
VSKTSAAACAVTDLSDDSDFDEKAKLKYYKEIEDRQKLKRKKEENSTEEQALEDQNAKRAITYQIAKNRG
LTPRRKKIDRNPRVKHREKFRRAKIRRRGQVREVRKEEQRYSGELSGIRAGVKKSIKLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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