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Report for CCDS9463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9463.1 Public Homo sapiens 13 SPRY2 24 110 108 CCDS HistoryNCBI Gene:10253Re-query CCDS DB by CCDS ID:9463.1Re-query CCDS DB by GeneID:10253See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9463.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377102.5 ENSP00000366306.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377102.5Link to Ensembl Protein Viewer:ENSP00000366306.1Re-query CCDS DB by Nucleotide ID:ENST00000377102Re-query CCDS DB by Protein ID:ENSP00000366306
Original member Current member EBI ENST00000377104.4 ENSP00000366308.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377104.4Link to Ensembl Protein Viewer:ENSP00000366308.3Re-query CCDS DB by Nucleotide ID:ENST00000377104Re-query CCDS DB by Protein ID:ENSP00000366308
Original member Current member NCBI NM_001318536.1 NP_001305465.1 Accepted alive Link to Nucleotide Sequence:NM_001318536.1Link to Protein Sequence:NP_001305465.1Re-query CCDS DB by Nucleotide ID:NM_001318536Re-query CCDS DB by Protein ID:NP_001305465Link to BLAST:NP_001305465.1
Original member Current member NCBI NM_001318537.1 NP_001305466.1 Accepted alive Link to Nucleotide Sequence:NM_001318537.1Link to Protein Sequence:NP_001305466.1Re-query CCDS DB by Nucleotide ID:NM_001318537Re-query CCDS DB by Protein ID:NP_001305466Link to BLAST:NP_001305466.1
Original member Current member NCBI NM_001318538.1 NP_001305467.1 Accepted alive Link to Nucleotide Sequence:NM_001318538.1Link to Protein Sequence:NP_001305467.1Re-query CCDS DB by Nucleotide ID:NM_001318538Re-query CCDS DB by Protein ID:NP_001305467Link to BLAST:NP_001305467.1
Original member Current member NCBI NM_005842.4 NP_005833.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005842.4Link to Protein Sequence:NP_005833.1Re-query CCDS DB by Nucleotide ID:NM_005842Re-query CCDS DB by Protein ID:NP_005833Link to BLAST:NP_005833.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305465.1 315 O43597 315 100% 0 0
NP_001305466.1 315 O43597 315 100% 0 0
NP_001305467.1 315 O43597 315 100% 0 0
NP_005833.1 315 O43597 315 100% 0 0

Chromosomal Locations for CCDS 9463.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 80336758 80337705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGAGGCCAGAGCTCAGAGTGGCAACGGGTCGCAGCCCTTGCTGCAGACGCCCCGTGACGGTGGCAGAC
AGCGTGGGGAGCCCGACCCCAGAGACGCCCTCACCCAGCAGGTACATGTCTTGTCTCTGGATCAGATCAG
AGCCATCCGAAACACCAATGAGTACACAGAGGGGCCTACTGTCGTCCCAAGACCTGGGCTCAAGCCTGCT
CCTCGCCCCTCCACTCAGCACAAACACGAGAGACTCCACGGTCTGCCTGAGCACCGCCAGCCTCCTAGGC
TCCAGCACTCGCAGGTCCATTCTTCTGCACGAGCCCCTCTGTCCAGATCCATAAGCACGGTCAGCTCAGG
GTCGCGGAGCAGTACGAGGACAAGTACCAGCAGCAGCTCCTCTGAACAGAGACTGCTAGGATCATCCTTC
TCCTCCGGGCCTGTTGCTGATGGCATAATCCGGGTGCAACCCAAATCTGAGCTCAAGCCAGGTGAGCTTA
AGCCACTGAGCAAGGAAGATTTGGGCCTGCACGCCTACAGGTGTGAGGACTGTGGCAAGTGCAAATGTAA
GGAGTGCACCTACCCAAGGCCTCTGCCATCAGACTGGATCTGCGACAAGCAGTGCCTTTGCTCGGCCCAG
AACGTGATTGACTATGGGACTTGTGTATGCTGTGTGAAAGGTCTCTTCTATCACTGTTCTAATGATGATG
AGGACAACTGTGCTGACAACCCATGTTCTTGCAGCCAGTCTCACTGTTGTACACGATGGTCAGCCATGGG
TGTCATGTCCCTCTTTTTGCCTTGTTTATGGTGTTACCTTCCAGCCAAGGGTTGCCTTAAATTGTGCCAG
GGGTGTTATGACCGGGTTAACAGGCCTGGTTGCCGCTGTAAAAACTCAAACACAGTTTGCTGCAAAGTTC
CCACTGTCCCCCCTAGGAACTTTGAAAAACCAACATAG

Translation (315 aa):
MEARAQSGNGSQPLLQTPRDGGRQRGEPDPRDALTQQVHVLSLDQIRAIRNTNEYTEGPTVVPRPGLKPA
PRPSTQHKHERLHGLPEHRQPPRLQHSQVHSSARAPLSRSISTVSSGSRSSTRTSTSSSSSEQRLLGSSF
SSGPVADGIIRVQPKSELKPGELKPLSKEDLGLHAYRCEDCGKCKCKECTYPRPLPSDWICDKQCLCSAQ
NVIDYGTCVCCVKGLFYHCSNDDEDNCADNPCSCSQSHCCTRWSAMGVMSLFLPCLWCYLPAKGCLKLCQ
GCYDRVNRPGCRCKNSNTVCCKVPTVPPRNFEKPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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