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Report for CCDS18249.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18249.1 Public Mus musculus 4 Kif12 23 108 98 CCDS HistoryNCBI Gene:16552Re-query CCDS DB by CCDS ID:18249.1Re-query CCDS DB by GeneID:16552See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18249.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030042.2 ENSMUSP00000030042.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030042.2Link to Ensembl Protein Viewer:ENSMUSP00000030042.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000030042Re-query CCDS DB by Protein ID:ENSMUSP00000030042
Original member Current member NCBI NM_010616.3 NP_034746.1 Accepted alive Link to Nucleotide Sequence:NM_010616.3Link to Protein Sequence:NP_034746.1Re-query CCDS DB by Nucleotide ID:NM_010616Re-query CCDS DB by Protein ID:NP_034746Link to BLAST:NP_034746.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034746.1 642 Q9D2Z8 642 100% 0 0

Chromosomal Locations for CCDS 18249.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 63165832 63165971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63166209 63166327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63166407 63166507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63166934 63167032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63167108 63167192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63167477 63167563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63167729 63167819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63167902 63168004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63168494 63168598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63168687 63168805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63169365 63169521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63169701 63169792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63170431 63170566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63170688 63170822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63171154 63171229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63171319 63171431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63171652 63171730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63171821 63171886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63171980 63172005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1929 nt):
ATGGAGGAACGTGGGTCTCCCGATGGAGACCCAGCACGGAACCTGGAGCAAGGGCCAGAAGGATCAGAAA
CTCCCATTCAAGTGGTGCTCAGGGTGCGTCCCATGAGCACAGTGGAGCTGCGTCGAGGGGAGCAGAGTGC
ATTGCACTGTTCGGGGACCAGGACTCTGCAGGTGAGCCCCGATGTGGCGTTCCGCTTTGGCGCCGTACTG
GACGGGGCGCGCACGCAGGAGGACGTGTTCAGAGCTTGCGGTGTGAAGCGCCTGGGTGAGCTGGCGCTGC
GCGGTTTCTCCTGCACGGTCTTCACGTTTGGCCAGACTGGTTCTGGGAAGACCTACACTCTGACTGGACC
TCCTCCGCAGGGGGAAGGGGTGCCCGTCCCCCCAAGCCTGGCTGGCATCATGCAGAGGACCTTCACCTGG
CTATTAGATCGCGTGCAGCACCTGGATTCCCCGGTCACCCTCCGAGCTTCCTACCTGGAGATCTACAATG
AGCAGGTTTGGGACTTGCTGAGTCTGGGGTCTCCACGGCCTCTGCCTGTTAGATGGACCAAGGCACGAGG
CTTCTATGTGGAACAGCTTCGGGTGGTGGAGTTTGGCAGTCTGGAGGCTTTGATGGAGCTCCTGCAGATG
GGTCTCAGCCGTCGTCGGAGCTCCTCACATACCTTGAACCAGGCCTCCAGCAGAAGCCATGCCCTGCTTA
CACTCCACATCAGCCGCCCAACTTCTCAGCAGGTACCTCCTGTGGACCTTGGGGAGCCCCCTGTTGGAGG
GAAGCTGTGCTTTGTGGATCTTGCAGGCAGTGAGAAAGTGGCAGCCACAGGATCCCAAGGGCAGCTGATG
CTTGAGGCCAATAGCATCAACCGCAGCCTATTGGCATTGGGCCACTGCATCTCCCTGCTGTTGGACCCAC
AGAGGAAGCAGAACCACATTCCCTTCCGGGACAGCAAGCTCACCAAGTTGCTGGCAGACTCACTTGGGGG
CCGTGGGGTCACACTCATGGTTGCCTGCGTGTCCCCTTCAGCGCAGTGCCTTCCTGAGACTCTCAGCACT
CTGCGATATGCAAGCCGAGCTCAGCGGATCACCACCCGGCCACAGGGTCCCAAGTCCCCTGGAGTAAAGC
CACCCCAGCAAGTAGAGAACGAGTTGCTAAGGCTCCAAGAGGAGAATCGTCACCTGCGGTTCCAGCTGGA
TCAGATGCACACCACGGCACCAGGGGCCCATGGAGCCCGGATGGCCTGGGCCCAGAGAAACCTCTATGGG
ATGCTGCAGGAGTTTATGCTGGAGAACGAGAGGCTCAGGAAGGAAATGAGACAGCTGAGGAGTAGCCGGG
ACCTGGCCCGGGCAGAGCAGCGTGTCCTGGCCCAACAGGTCCATGATCTGGAGAGGCGCCTCCTTTCGGC
TTGTCCCCTTCCCCAGCAGGGCTCTACCCCTGTGTGTCCCTGCAGGATGGTTCCAGCTGCCTCCTGCCAT
GCACTGCCACCCCTCTGTTACTGCCACCACTTCTGTCCTCTGTGCCGAGTGCCCTTGGCCCACTGGACCT
GCCCACGGAGAGAGTGCCACATGCCACAGGTGCTGGAGCCCGAGGCCCCAGGTCACATATCTCAGTCTGT
GTGGCCCCCACCCTGGGCACCTCCACCAAGCCCAGGCTCTGCCAAGCCCCCACGAGAGAGGAGCCAGAGT
GACTGGACCCAGACACGAGTCCTGGCAGAGATGCTGATGGGAGAAGAAGTGGTACCCTCCGCACCACCCC
TGTCTGCAGGGCCCTCGAACATGCCATATGGGCTAAGAGGAGGATCTGGGATTCCAAACCTGACCCCGAG
GCTGGAAACCCTCACACAGCAGATCAACAGCTCCCTGCACCTCAGCCAGAGACAACCACAGCCTAGCGAG
GACACACAGAGCCCTGGCCAAGGCCTCTCTTCTTGTTAA

Translation (642 aa):
MEERGSPDGDPARNLEQGPEGSETPIQVVLRVRPMSTVELRRGEQSALHCSGTRTLQVSPDVAFRFGAVL
DGARTQEDVFRACGVKRLGELALRGFSCTVFTFGQTGSGKTYTLTGPPPQGEGVPVPPSLAGIMQRTFTW
LLDRVQHLDSPVTLRASYLEIYNEQVWDLLSLGSPRPLPVRWTKARGFYVEQLRVVEFGSLEALMELLQM
GLSRRRSSSHTLNQASSRSHALLTLHISRPTSQQVPPVDLGEPPVGGKLCFVDLAGSEKVAATGSQGQLM
LEANSINRSLLALGHCISLLLDPQRKQNHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLST
LRYASRAQRITTRPQGPKSPGVKPPQQVENELLRLQEENRHLRFQLDQMHTTAPGAHGARMAWAQRNLYG
MLQEFMLENERLRKEMRQLRSSRDLARAEQRVLAQQVHDLERRLLSACPLPQQGSTPVCPCRMVPAASCH
ALPPLCYCHHFCPLCRVPLAHWTCPRRECHMPQVLEPEAPGHISQSVWPPPWAPPPSPGSAKPPRERSQS
DWTQTRVLAEMLMGEEVVPSAPPLSAGPSNMPYGLRGGSGIPNLTPRLETLTQQINSSLHLSQRQPQPSE
DTQSPGQGLSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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