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Report for CCDS17660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17660.1 Public Mus musculus 3 Adam30 23 108 98 CCDS HistoryNCBI Gene:71078Re-query CCDS DB by CCDS ID:17660.1Re-query CCDS DB by GeneID:71078See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17660.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050342.4 ENSMUSP00000060505.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050342.4Link to Ensembl Protein Viewer:ENSMUSP00000060505.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000050342Re-query CCDS DB by Protein ID:ENSMUSP00000060505
Original member Current member NCBI NM_027665.2 NP_081941.1 Accepted alive Link to Nucleotide Sequence:NM_027665.2Link to Protein Sequence:NP_081941.1Re-query CCDS DB by Nucleotide ID:NM_027665Re-query CCDS DB by Protein ID:NP_081941Link to BLAST:NP_081941.1

Chromosomal Locations for CCDS 17660.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 98160853 98163051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2199 nt):
ATGAGGTCAGTGTGGGCCTTCCTGCCCCAGCACCGCTGGCTGTTTCTGACGATGCTCTTTCATGAGGCTG
TAGGCGAAGAAGACCTACTATTTGACCCTGACTGGGGCTTTGACTCATATGAAATCACCATTCCCAAAGT
AATAAGCTTTAAGAAAGGGGCGCAGGGTGTAGACAGTTCTTTGTCATACCTCTTACAGATAGAAGGCAAG
GCGCGTGTTGTTCACCTGCGACCCAAGAAGTTACTGTTGCCAAGACATCTGCCAGTTTTCTCCTTCACTC
AAGAGGGCAGTCTGATAGAGGATTATCCGCATATACCAGACCAGTGTAATTACGTGGGCTCCGTGGAAGG
CTCTCAGGAATCCGAATCTACTCTGAGTACATGCATGGGAGGTCTGCGAGGCGTACTGAACATTGACTCC
AGATACTACCAAATCGAGCCCCTCAGGGCCTCTTCCAGTTTCGAACACGTGGTGTATCTCGTAACTGAGG
ACAACTTTAACAATGAGACTTGTGGTGTGGTTGATGAAGAAACAGGTGGGCAAACAGCCGAGGAAGAGGA
GATGGCTAGGATAAGTAGTTTTCATCAGTCCTACAAGCACCAAAGGTACCTGGAACTGGTCATGGTCTTT
GACCTGGATAGATTCGTGTTTGCCCGTGGCAATATGTCTAGGATGGTGGATGACGCCATTCTTTTGGCTT
CAATTGCAGACACCTACTTTCAGGATGTCAGCTTGAAGATTCAACTGAAAGCGCTTGAAGTCTGGACATA
CTATAATAGAATACGTCTTTATTATCCCAGTTTATCTGAAGTTTTAGGTCAATTCGTGCATTACAAAAGA
AACTCAATGCATCACCGGCTTCCCGCGGACTGGTTCCATTTATATATTGCGAGAAGATATATAGATGCTA
ATGCATGGTCCTGGGGAAGAGCCTGTGAAGAATTCCATGCTGGATCAGCAAGCAGCTTCCTCAATGTTAA
TATCCTTGGGCCTGCTACTTGGACTGCTCATGAATTGGGCCATTGTGTGGGGATGATACATGATGAGGAA
TTCTGTCAGTGTAGAGGTAGGAAGAGCTGCATCATGGGGACAGGACGTACAGGGTTTAGTAACTGTAGTT
ACCATCAGTATTTTTTACACGCATCTTATAAAATGTCCTATTGTCTGTCTGACTTCCCAAAGCTACATAT
CGTAGAGAGGTGTGGAAATAAAATTGTGGAAAACAAAGAGGAATGTGACTGTGGTTCTAAAGAAGACTGC
AAAAAAGACCTGTGCTGTGGGCCGGACTGTAAATGGAAAGAAGGTGTCAACTGCTCCTCTGGGCTTTGCT
GTCATAAATGTAACTTCCTTCCATCAGGATATGTGTGTAGGAAGGAAGTGAATGAGTGTGACCTCGAAGA
GTACTGTGATGGGACCTCAGGTGTCTGTCCAGATGACTCTTACAAGCAGGATGGAACTCCATGCAGAAAC
GGAGGCTTTTGTTTCCGTAAGGGATGCAGATCCAGGTACCTGCAGTGCCAGTCTATCTTTGGGCGTAAAG
CCAAGGAGGCCCCTCACCAGTGTTACGAAGCAGTGAACATGTTAGGTGACCAGTCTGGGAACTGTGGCAT
TGTAAATGCTACCCGATATACAAGGTGTCATAGAGGCAACACAATCTGTGGCAGGCTACAGTGTATCAAT
GTTAAAGCCCTCTCCAAATTTCCAGATCACACCATTATACTGTCCACTTATCTGAGGGGAGATAATCTCA
TTTGCTGGGGCACAAGCTATCATGGAACCATGATACCCCATGGGGTACCTGACATAGGTGACATTAGTGA
TGGTACCTCCTGTGGTCGTAATCGGGTGTGTCTTAACAGGACTTGTGTGGACTACACCAACCTGAAGTTT
GACTGTTTACCTGACAAGTGCAATAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCATATG
GCTGGGAACCCCCATTTTGTGTAGAGGTAGGATACGGTGGGAGCCTTGACAGTGGGCCTCCTGGACCCAG
GATAGAAGTACTTTCAACGACTAGTGCTCTGTACATGTTGCGTACTATCTTATTCCTCGTCTCCATGATT
GTTGTGTGTTTGGGGCAGCTGATAAGAAATTTGTTTCGTAATCGCCGCCGTAATCTCCAGCAAAAAAATC
CAGCTGAGACGCAGGGGAAGAAGAGGTGA

Translation (732 aa):
MRSVWAFLPQHRWLFLTMLFHEAVGEEDLLFDPDWGFDSYEITIPKVISFKKGAQGVDSSLSYLLQIEGK
ARVVHLRPKKLLLPRHLPVFSFTQEGSLIEDYPHIPDQCNYVGSVEGSQESESTLSTCMGGLRGVLNIDS
RYYQIEPLRASSSFEHVVYLVTEDNFNNETCGVVDEETGGQTAEEEEMARISSFHQSYKHQRYLELVMVF
DLDRFVFARGNMSRMVDDAILLASIADTYFQDVSLKIQLKALEVWTYYNRIRLYYPSLSEVLGQFVHYKR
NSMHHRLPADWFHLYIARRYIDANAWSWGRACEEFHAGSASSFLNVNILGPATWTAHELGHCVGMIHDEE
FCQCRGRKSCIMGTGRTGFSNCSYHQYFLHASYKMSYCLSDFPKLHIVERCGNKIVENKEECDCGSKEDC
KKDLCCGPDCKWKEGVNCSSGLCCHKCNFLPSGYVCRKEVNECDLEEYCDGTSGVCPDDSYKQDGTPCRN
GGFCFRKGCRSRYLQCQSIFGRKAKEAPHQCYEAVNMLGDQSGNCGIVNATRYTRCHRGNTICGRLQCIN
VKALSKFPDHTIILSTYLRGDNLICWGTSYHGTMIPHGVPDIGDISDGTSCGRNRVCLNRTCVDYTNLKF
DCLPDKCNSRGVCNNRKNCHCSYGWEPPFCVEVGYGGSLDSGPPGPRIEVLSTTSALYMLRTILFLVSMI
VVCLGQLIRNLFRNRRRNLQQKNPAETQGKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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