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Report for CCDS33434.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33434.1 Public Homo sapiens 20 SIRPG 24 110 108 CCDS HistoryNCBI Gene:55423Re-query CCDS DB by CCDS ID:33434.1Re-query CCDS DB by GeneID:55423See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33434.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216927.4 ENSP00000216927.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000216927.4Link to Ensembl Protein Viewer:ENSP00000216927.4Re-query CCDS DB by Nucleotide ID:ENST00000216927Re-query CCDS DB by Protein ID:ENSP00000216927
Original member Current member EBI ENST00000381583.6 ENSP00000370995.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381583.6Link to Ensembl Protein Viewer:ENSP00000370995.2Re-query CCDS DB by Nucleotide ID:ENST00000381583Re-query CCDS DB by Protein ID:ENSP00000370995
Original member Current member NCBI NM_001039508.2 NP_001034597.1 Accepted alive Link to Nucleotide Sequence:NM_001039508.2Link to Protein Sequence:NP_001034597.1Re-query CCDS DB by Nucleotide ID:NM_001039508Re-query CCDS DB by Protein ID:NP_001034597Link to BLAST:NP_001034597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034597.1 276 Q9P1W8-4 276 100% 0 0

Chromosomal Locations for CCDS 33434.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 1630224 1630306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 1636188 1636505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 1649052 1649408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 1657642 1657714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGCCTGTCCCAGCCTCCTGGCCCCATCCTCCTGGTCCTTTCCTGCTTCTGACTCTACTGCTGGGACTTA
CAGAAGTGGCAGGTGAGGAGGAGCTACAGATGATTCAGCCTGAGAAGCTCCTGTTGGTCACAGTTGGAAA
GACAGCCACTCTGCACTGCACTGTGACCTCCCTGCTTCCCGTGGGACCCGTCCTGTGGTTCAGAGGAGTT
GGACCAGGCCGGGAATTAATCTACAATCAAAAAGAAGGCCACTTCCCCAGGGTAACAACAGTTTCAGACC
TCACAAAGAGAAACAACATGGACTTTTCCATCCGCATCAGTAGCATCACCCCAGCAGATGTCGGCACATA
CTACTGTGTGAAGTTTCGAAAAGGGAGCCCTGAGAACGTGGAGTTTAAGTCTGGACCAGGCACTGAGATG
GCTTTGGGTGCCAAACCCTCTGCCCCCGTGGTATTGGGCCCTGCGGCGAGGACCACACCTGAGCATACAG
TGAGTTTCACCTGTGAGTCCCATGGCTTCTCTCCCAGAGACATCACCCTGAAATGGTTCAAAAATGGGAA
TGAGCTCTCAGACTTCCAGACCAACGTGGACCCCACAGGACAGAGTGTGGCCTACAGCATCCGCAGCACA
GCCAGGGTGGTACTGGACCCCTGGGACGTTCGCTCTCAGGTCATCTGCGAGGTGGCCCATGTCACCTTGC
AGGGGGACCCTCTTCGTGGGACTGCCAACTTGTCTGAGGCCATCCGAGGCCCGGCATCATCCCTTACTGC
GCTGCTCCTCATAGCTGTCCTCCTGGGCCCCATCTACGTCCCCTGGAAGCAGAAGACCTGA

Translation (276 aa):
MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGV
GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM
ALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRST
ARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRGPASSLTALLLIAVLLGPIYVPWKQKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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