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Report for CCDS44729.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44729.1 Public Homo sapiens 11 FDXACB1 24 110 108 CCDS HistoryNCBI Gene:91893Re-query CCDS DB by CCDS ID:44729.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44729.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260257.9 ENSP00000260257.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000260257.9Link to Ensembl Protein Viewer:ENSP00000260257.4Re-query CCDS DB by Nucleotide ID:ENST00000260257Re-query CCDS DB by Protein ID:ENSP00000260257
Original member Current member NCBI NM_138378.3 NP_612387.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138378.3Link to Protein Sequence:NP_612387.1Re-query CCDS DB by Nucleotide ID:NM_138378Re-query CCDS DB by Protein ID:NP_612387Link to BLAST:NP_612387.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612387.1 624 Q9BRP7-1 624 100% 0 0

Chromosomal Locations for CCDS 44729.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 111874922 111876104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111876481 111876639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111876808 111877011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111878556 111878712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111878961 111879132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1875 nt):
ATGGCCCCTCGGCGCCTCCTGTTGGTTGGGGAGGGGAATTTCTCCTTCGCCGCCGCTCTGAGCGAAACCC
TGGATCAGAGCACTCAACTTACCGCCACCTGCCTCCAGCGCCCGGCCGAGTTGGCTCGGGATCCACTGGC
CTGGGAGAATCTGCAGTGCCTGCGCGAGCGAGGTATCGATGTACGTTTCGGTGTGGACTGCACCCAGCTG
GCAGATGTCTTTGAACTGCACGAGAGAGAATTTGATCAAATTTATTTCATCTTCCCGCATTGTGGACGCA
AAGCTGGCGTAGCTAAGAACAGGGAACTGCTTGCCAAATTTTTCCAAAGCTGTGCAGACGTTCTTGCAGA
GGAAGGAGAAGTCCACGTGGCATTATGTAGAGGACAAGGTGGAACTCCTGCGGATAAGCCCCAGAGAGAA
TGGCACAACAGTTGGCAAGTGGTTGCCATGGCAGCCCTGGGGGGGCTCATTTTAAGCGACGTGTATCCAT
TCAGCTGTAAGGCTGTGGCAGGGTACAAGTGCACTGGATATAGGAGTCAAGATAAGTCCTTTCATGTAGA
AGGTGCTTTGAACCATATCTTCACCAGGAGCTTACCTTTTGAAGGTTCTCAACCCAGAATCTTCAGGATC
AAACTGGGTAACCAGTGGTTTTCCTTTCCAGAACCAGAAGCACTTGTAGGAAAGTTGAACAGGGGTTTCC
TGGAAGCACCTTCATGTCATCCTATCAAAACCATAAATGAGAAACTCATTGCTGAATTAGGCAAAGTTTT
CCCGCTAAAAAGGCTGAAGTGTTCCTACCCTTTGCTGCCACAGGAAGGTACCAGTGTTCTTCCTTTCTGG
AATTGTGACTTTCTGTCAGCTGCTTTTTGGATTAGTCTCCATGAAGATAACTCAAATTCTGAGTCCCTGA
CTGGTGGGACATCACAAGATGTGGAAGACTTTCTAGTGTCATTTTCAGAACTTAGCCTTCTCAAGAATCC
TGGAAGAGATGGTAAAGAAGAAGCTTGTGAAGGAACCTGTGGCCAGGCCAAGATCTGCCTTAGACCTTCT
CTCCTAGTGCATGTTCAGGATGTCATCGAAGTACCAGACTTCCTCTCAGGTTCTCTGCACATCCTCAGTG
GACCTGTCTTTCAGAAGTGCCACATTTTGCCTTTCACAATGCCAGCATTTCATGAAACTTTATTTATCCT
TGGGGTTAATCAAAATCTGAAGGATGGCTGTCTTCAATCACTGCTGGATCATCTGAAGGGCATTCTAGAT
AGCCTGCTGACCCAGACATTGCCGGAGAGCTCTAAGCTGAGCAGTTTAGTCAAATTTGTCCTTCAGTCAA
ATGGAAAGGATTATATGATTCGTGTGAAGACTCATAATTTTAGCCCAGATTGTACTGAGGATCTAATTAT
TGGGTCTGTTATCACATCTGCCACTAGTGTTATACATAAAGACCAGTGTTTTGTGTTTGTGTCTATGAAC
TTGGACTTATTAGCCATGCTTGTCTGGTGTATCTCTGACTGGAGAATGTTGTGGACGTTTGATAACCGTT
TCCTGAAAAATTTTGTCCCTGGCAAAATAGAACCCTTTAAAAGTCATTCTCTGTATCCTCCATGTTATGT
GCATGATGTTAGTTTTTGGATAGATCAGAAGAAAGGATTTGATGAACTAGAGTTTCACACTGTGGCCCGA
GCAGTGTCTCAGGACACTATTATATCCATACAGTTTCTTAGCCGTTTCCAGCATCCAAAGACTCAACAGG
TCAGTCTCTGCTATAGATTGACCTACCAGACCTGTGACAAGGCCCTCACCCAGCAGCAAGTAGCATCAAT
GCAGTCCCAGTTTAGGAAGGAGATTCAACAACACCTATATGTTATACCTCGGTAG

Translation (624 aa):
MAPRRLLLVGEGNFSFAAALSETLDQSTQLTATCLQRPAELARDPLAWENLQCLRERGIDVRFGVDCTQL
ADVFELHEREFDQIYFIFPHCGRKAGVAKNRELLAKFFQSCADVLAEEGEVHVALCRGQGGTPADKPQRE
WHNSWQVVAMAALGGLILSDVYPFSCKAVAGYKCTGYRSQDKSFHVEGALNHIFTRSLPFEGSQPRIFRI
KLGNQWFSFPEPEALVGKLNRGFLEAPSCHPIKTINEKLIAELGKVFPLKRLKCSYPLLPQEGTSVLPFW
NCDFLSAAFWISLHEDNSNSESLTGGTSQDVEDFLVSFSELSLLKNPGRDGKEEACEGTCGQAKICLRPS
LLVHVQDVIEVPDFLSGSLHILSGPVFQKCHILPFTMPAFHETLFILGVNQNLKDGCLQSLLDHLKGILD
SLLTQTLPESSKLSSLVKFVLQSNGKDYMIRVKTHNFSPDCTEDLIIGSVITSATSVIHKDQCFVFVSMN
LDLLAMLVWCISDWRMLWTFDNRFLKNFVPGKIEPFKSHSLYPPCYVHDVSFWIDQKKGFDELEFHTVAR
AVSQDTIISIQFLSRFQHPKTQQVSLCYRLTYQTCDKALTQQQVASMQSQFRKEIQQHLYVIPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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