NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS2291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2291.1 Public Homo sapiens 2 ZNF804A 24 110 108 CCDS HistoryNCBI Gene:91752Re-query CCDS DB by CCDS ID:2291.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2291.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302277.7 ENSP00000303252.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302277.7Link to Ensembl Protein Viewer:ENSP00000303252.6Re-query CCDS DB by Nucleotide ID:ENST00000302277Re-query CCDS DB by Protein ID:ENSP00000303252
Original member Current member NCBI NM_194250.2 NP_919226.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_194250.2Link to Protein Sequence:NP_919226.1Re-query CCDS DB by Nucleotide ID:NM_194250Re-query CCDS DB by Protein ID:NP_919226Link to BLAST:NP_919226.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_919226.1 1209 Q7Z570 1209 100% 0 0

Chromosomal Locations for CCDS 2291.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 184598960 184599070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 184866369 184866512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 184933603 184933733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 184935783 184939026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3630 nt):
ATGGAGTGTTACTACATTGTCATCAGCTCCACGCATCTCAGCAACGGACACTTTCGCAACATCAAGGGAG
TTTTCCGGGGCCCTCTCAGCAAGAACGGGAACAAAACTCTGGACTATGCTGAGAAGGAAAATACCATAGC
AAAAGCTCTGGAAGATCTGAAGGCAAATTTTTACTGTGAACTCTGTGACAAGCAGTACTATAAGCACCAG
GAGTTTGACAATCACATTAATTCATATGACCATGCTCACAAGCAGAGGCTCAAGGAACTGAAACAAAGGG
AATTTGCTCGAAATGTAGCATCTAAATCCAGGAAAGATGAAAGAAAACAGGAAAAGGCACTCCAACGCCT
GCACAAGCTGGCTGAGCTAAGAAAGGAAACTGTATGTGCTCCTGGAAGTGGCCCCATGTTCAAATCAACA
ACTGTTACTGTGAGAGAAAACTGTAATGAAATTTCCCAACGAGTTGTTGTGGATTCAGTTAATAACCAGC
AAGATTTCAAATATACTTTGATTCATAGTGAAGAGAATACTAAAGATGCTACCACTGTTGCTGAAGATCC
AGAAAGTGCAAATAATTATACAGCAAAAAATAACCAAGTTGGGGATCAAGCCCAGGGGATTCACAGACAC
AAAATCGGCTTTTCTTTTGCATTTCCAAAGAAAGCGTCCGTGAAGCTAGAGTCCTCAGCTGCAGCCTTCT
CTGAATACAGTGATGATGCCTCAGTGGGAAAAGGATTTAGCAGAAAAAGTAGATTTGTCCCCAGTGCTTG
TCATCTTCAACAATCTTCACCAACAGATGTGCTTTTGAGTTCTGAGGAGAAAACTAACTCTTTTCATCCA
CCAGAGGCAATGTGCAGAGACAAAGAAACTGTTCAAACTCAAGAGATAAAAGAAGTCTCTAGTGAAAAAG
ATGCATTATTATTACCTTCATTTTGCAAGTTTCAACTTCAGTTATCTTCTGATGCAGATAATTGTCAAAA
TTCAGTCCCATTAGCAGATCAAATACCACTAGAGAGTGTTGTTATTAATGAAGACATACCTGTTAGTGGT
AACAGTTTTGAGTTGTTAGGAAATAAATCCACAGTTCTTGACATGTCTAATGATTGCATATCTGTGCAAG
CTACCACAGAGGAAAATGTTAAGCATAACGAGGCATCCACAACTGAGGTTGAAAATAAAAATGGTCCCGA
GACATTGGCCCCTTCAAATACTGAAGAGGTTAACATAACTATACATAAGAAAACAAATTTCTGCAAAAGA
CAATGTGAGCCATTTGTACCTGTCCTTAACAAACACAGATCTACAGTTCTTCAGTGGCCATCAGAAATGC
TGGTTTATACAACTACGAAACCATCAATTTCCTATAGCTGTAATCCTCTATGTTTTGACTTCAAGTCTAC
TAAAGTAAATAATAATCTAGATAAAAATAAGCCAGACTTAAAAGATCTTTGTTCTCAGCAGAAGCAGGAA
GACATTTGCATGGGACCACTTTCAGATTACAAGGATGTATCTACAGAAGGACTCACTGATTATGAAATTG
GAAGTAGCAAAAATAAATGCAGCCAAGTCACTCCTCTTTTGGCTGATGATATTCTCTCCAGTAGTTGTGA
TTCTGGAAAAAATGAGAACACAGGTCAGAGGTATAAAAACATTTCCTGTAAGATCAGAGAAACAGAAAAG
TATAATTTTACTAAAAGTCAAATAAAACAGGACACTCTAGATGAAAAATACAACAAAATAAGGTTGAAAG
AGACCCATGAATACTGGTTCCATAAAAGTAGAAGAAAGAAAAAAAGAAAAAAGTTATGTCAGCATCATCA
TATGGAGAAAACCAAAGAATCAGAAACTCGCTGCAAAATGGAAGCAGAGAATAGTTACACTGAAAATGCT
GGGAAATATCTATTGGAACCAATTTCAGAAAAGCAGTATTTAGCTGCAGAGCAATTATTAGACTCACATC
AGTTACTTGATAAAAGGCCCAAATCAGAATCCATATCCTTAAGTGACAATGAAGAAATGTGTAAAACATG
GAATACTGAATACAACACTTATGATACTATCAGTTCTAAAAACCACTGTAAAAAGAACACAATACTTTTA
AATGGACAATCAAATGCAACAATGATACATTCTGGGAAACATAATTTAACATATTCTAGAACTTACTGTT
GTTGGAAAACCAAAATGTCAAGCTGTAGTCAGGATCACAGAAGCTTAGTTCTTCAAAATGATATGAAACA
CATGAGTCAGAATCAGGCTGTTAAAAGAGGTTACAATTCTGTCATGAATGAATCAGAAAGATTCTATCGA
AAACGTAGACAACATTCACATTCTTATTCTTCAGATGAAAGTTTAAATCGACAGAATCATTTACCAGAAG
AATTTTTGAGGCCACCAAGTACTTCAGTTGCTCCCTGCAAGCCTAAAAAGAAACGGAGGCGAAAAAGAGG
CAGATTCCACCCCGGATTTGAAACTTTAGAACTCAAAGAAAATACAGATTATCCCGTGAAAGACAATTCT
TCCTTAAATCCTCTGGATAGGTTAATAAGTGAAGACAAAAAAGAGAAAATGAAACCACAAGAAGTTGCAA
AAATCGAAAGGAACTCAGAACAAACAAACCAATTAAGAAACAAACTGTCTTTCCACCCTAACAATCTCCT
TCCTTCTGAAACCAATGGTGAAACTGAGCATTTAGAAATGGAGACCACTTCTGGTGAATTGTCAGATGTT
TCCAATGATCCCACCACATCTGTCTGTGTAGCTAGTGCCCCAACAAAAGAAGCAATTGACAATACCCTGC
TTGAACACAAAGAAAGAAGTGAGAATATAAATCTTAATGAAAAGCAAATTCCTTTTCAGGTGCCTAATAT
TGAAAGGAACTTTAGACAGTCACAGCCTAAATCCTATCTTTGCCATTATGAACTGGCTGAGGCCCTTCCA
CAAGGAAAGATGAATGAGACACCAACTGAGTGGCTGCGTTATAATTCAGGAATCCTTAACACACAACCAC
CATTACCATTCAAAGAAGCACATGTCAGTGGTCATACTTTTGTAACAGCTGAGCAAATCCTGGCTCCATT
AGCTTTACCAGAGCAAGCATTATTGATCCCACTAGAAAACCATGACAAATTCAAAAATGTACCATGTGAG
GTCTACCAGCACATTCTGCAGCCAAACATGCTGGCCAACAAGGTTAAATTTACCTTTCCTCCAGCTGCCC
TCCCACCCCCTAGCACACCTCTGCAGCCTTTGCCTTTGCAGCAGTCCTTATGTTCTACCTCTGTAACCAC
TATCCATCACACTGTTTTGCAGCAGCACGCTGCAGCTGCTGCAGCTGCAGCTGCAGCCGCAGCTGCAGGA
ACCTTTAAAGTGCTTCAGCCACACCAACAGTTTCTTTCCCAAATCCCAGCTCTCACCAGAACCTCATTAC
CTCAGCTCTCAGTAGGACCAGTAGGACCGAGGCTTTGTCCTGGGAACCAGCCAACTTTTGTTGCTCCTCC
TCAGATGCCAATCATTCCAGCTTCCGTTCTTCATCCTAGCCATCTGGCTTTCCCATCTTTACCCCATGCA
CTCTTTCCTTCACTGCTTTCCCCACACCCTACTGTCATCCCTTTGCAACCTCTCTTCTAG

Translation (1209 aa):
MECYYIVISSTHLSNGHFRNIKGVFRGPLSKNGNKTLDYAEKENTIAKALEDLKANFYCELCDKQYYKHQ
EFDNHINSYDHAHKQRLKELKQREFARNVASKSRKDERKQEKALQRLHKLAELRKETVCAPGSGPMFKST
TVTVRENCNEISQRVVVDSVNNQQDFKYTLIHSEENTKDATTVAEDPESANNYTAKNNQVGDQAQGIHRH
KIGFSFAFPKKASVKLESSAAAFSEYSDDASVGKGFSRKSRFVPSACHLQQSSPTDVLLSSEEKTNSFHP
PEAMCRDKETVQTQEIKEVSSEKDALLLPSFCKFQLQLSSDADNCQNSVPLADQIPLESVVINEDIPVSG
NSFELLGNKSTVLDMSNDCISVQATTEENVKHNEASTTEVENKNGPETLAPSNTEEVNITIHKKTNFCKR
QCEPFVPVLNKHRSTVLQWPSEMLVYTTTKPSISYSCNPLCFDFKSTKVNNNLDKNKPDLKDLCSQQKQE
DICMGPLSDYKDVSTEGLTDYEIGSSKNKCSQVTPLLADDILSSSCDSGKNENTGQRYKNISCKIRETEK
YNFTKSQIKQDTLDEKYNKIRLKETHEYWFHKSRRKKKRKKLCQHHHMEKTKESETRCKMEAENSYTENA
GKYLLEPISEKQYLAAEQLLDSHQLLDKRPKSESISLSDNEEMCKTWNTEYNTYDTISSKNHCKKNTILL
NGQSNATMIHSGKHNLTYSRTYCCWKTKMSSCSQDHRSLVLQNDMKHMSQNQAVKRGYNSVMNESERFYR
KRRQHSHSYSSDESLNRQNHLPEEFLRPPSTSVAPCKPKKKRRRKRGRFHPGFETLELKENTDYPVKDNS
SLNPLDRLISEDKKEKMKPQEVAKIERNSEQTNQLRNKLSFHPNNLLPSETNGETEHLEMETTSGELSDV
SNDPTTSVCVASAPTKEAIDNTLLEHKERSENINLNEKQIPFQVPNIERNFRQSQPKSYLCHYELAEALP
QGKMNETPTEWLRYNSGILNTQPPLPFKEAHVSGHTFVTAEQILAPLALPEQALLIPLENHDKFKNVPCE
VYQHILQPNMLANKVKFTFPPAALPPPSTPLQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAG
TFKVLQPHQQFLSQIPALTRTSLPQLSVGPVGPRLCPGNQPTFVAPPQMPIIPASVLHPSHLAFPSLPHA
LFPSLLSPHPTVIPLQPLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH