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Report for CCDS32470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32470.1 Public Homo sapiens 16 SLC7A6 24 110 108 CCDS HistoryNCBI Gene:9057Re-query CCDS DB by CCDS ID:32470.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219343.11 ENSP00000219343.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000219343.11Link to Ensembl Protein Viewer:ENSP00000219343.6Re-query CCDS DB by Nucleotide ID:ENST00000219343Re-query CCDS DB by Protein ID:ENSP00000219343
Original member Current member EBI ENST00000566454.5 ENSP00000455064.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566454.5Link to Ensembl Protein Viewer:ENSP00000455064.1Re-query CCDS DB by Nucleotide ID:ENST00000566454Re-query CCDS DB by Protein ID:ENSP00000455064
Original member Current member NCBI NM_001076785.3 NP_001070253.1 Accepted alive Link to Nucleotide Sequence:NM_001076785.3Link to Protein Sequence:NP_001070253.1Re-query CCDS DB by Nucleotide ID:NM_001076785Re-query CCDS DB by Protein ID:NP_001070253Link to BLAST:NP_001070253.1
Original member Current member NCBI NM_003983.6 NP_003974.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003983.6Link to Protein Sequence:NP_003974.3Re-query CCDS DB by Nucleotide ID:NM_003983Re-query CCDS DB by Protein ID:NP_003974Link to BLAST:NP_003974.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070253.1 515 Q92536 515 100% 0 0
NP_003974.3 515 Q92536 515 100% 0 0

Chromosomal Locations for CCDS 32470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 68274727 68275249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68287746 68287871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68290396 68290540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68291209 68291332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68291558 68291661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68294705 68294801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68296364 68296513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68296627 68296810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68297234 68297328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1548 nt):
ATGGAAGCCAGGGAGCCTGGGAGGCCCACACCCACCTACCATCTTGTCCCTAACACCAGCCAGTCCCAGG
TGGAAGAAGATGTCAGCTCGCCACCTCAAAGGTCCTCCGAAACTATGCAGCTGAAGAAGGAGATCTCCCT
GCTGAATGGGGTCAGCCTGGTGGTGGGCAACATGATCGGCTCAGGGATCTTTGTCTCACCCAAGGGTGTG
CTGGTACACACTGCCTCCTATGGGATGTCACTGATTGTGTGGGCCATTGGTGGGCTCTTCTCTGTTGTGG
GTGCCCTTTGTTATGCAGAGCTGGGGACCACCATCACCAAGTCGGGAGCCAGCTACGCTTATATTCTAGA
GGCCTTTGGGGGCTTCATTGCCTTCATCCGCCTGTGGGTCTCACTGCTAGTTGTTGAGCCCACCGGTCAG
GCCATCATCGCCATCACCTTTGCCAACTACATCATCCAGCCGTCCTTCCCCAGCTGTGATCCCCCATACC
TGGCCTGCCGTCTCCTGGCTGCTGCTTGCATATGTCTGCTGACATTTGTGAACTGTGCCTATGTCAAGTG
GGGCACACGTGTGCAGGACACGTTCACTTACGCCAAGGTCGTAGCGCTCATTGCCATCATTGTCATGGGC
CTTGTTAAACTGTGCCAGGGACACTCTGAGCACTTTCAGGACGCCTTTGAGGGTTCCTCCTGGGACATGG
GAAACCTCTCTCTTGCCCTCTACTCTGCCCTCTTCTCTTACTCAGGTTGGGACACCCTTAATTTTGTAAC
AGAAGAAATCAAAAACCCAGAAAGAAATTTGCCCTTGGCCATTGGGATTTCTATGCCAATTGTGACGCTC
ATCTACATCCTGACCAATGTGGCCTATTACACAGTGCTGAACATTTCAGATGTCCTTAGCAGTGATGCTG
TGGCTGTGACATTTGCTGACCAGACGTTTGGCATGTTCAGCTGGACCATCCCCATTGCTGTTGCCCTGTC
CTGCTTTGGGGGCCTCAATGCATCCATCTTTGCTTCATCAAGGTTGTTCTTCGTGGGCTCCCGGGAGGGC
CACCTACCGGACCTTCTGTCCATGATCCACATTGAGCGTTTTACACCTATCCCTGCTTTACTGTTCAATT
GCACCATGGCACTCATCTACCTCATCGTGGAGGATGTTTTCCAGCTTATCAACTACTTCAGCTTCAGCTA
CTGGTTCTTCGTGGGCCTGTCTGTTGTTGGACAGCTCTACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGG
CCTCTCAAGCTGAGCGTGTTTTTCCCCATCGTGTTCTGCATATGCTCCGTGTTTCTGGTGATAGTGCCCC
TCTTCACTGACACCATTAATTCCCTCATTGGCATCGGGATTGCCCTTTCTGGAGTCCCTTTCTACTTCAT
GGGTGTTTACCTGCCAGAGTCCCGGAGGCCATTGTTTATTCGGAATGTCCTGGCTGCTATCACCAGAGGC
ACCCAGCAGCTTTGCTTTTGTGTCCTGACTGAGCTTGATGTAGCCGAAGAAAAAAAGGATGAGAGGAAAA
CTGACTAG

Translation (515 aa):
MEAREPGRPTPTYHLVPNTSQSQVEEDVSSPPQRSSETMQLKKEISLLNGVSLVVGNMIGSGIFVSPKGV
LVHTASYGMSLIVWAIGGLFSVVGALCYAELGTTITKSGASYAYILEAFGGFIAFIRLWVSLLVVEPTGQ
AIIAITFANYIIQPSFPSCDPPYLACRLLAAACICLLTFVNCAYVKWGTRVQDTFTYAKVVALIAIIVMG
LVKLCQGHSEHFQDAFEGSSWDMGNLSLALYSALFSYSGWDTLNFVTEEIKNPERNLPLAIGISMPIVTL
IYILTNVAYYTVLNISDVLSSDAVAVTFADQTFGMFSWTIPIAVALSCFGGLNASIFASSRLFFVGSREG
HLPDLLSMIHIERFTPIPALLFNCTMALIYLIVEDVFQLINYFSFSYWFFVGLSVVGQLYLRWKEPKRPR
PLKLSVFFPIVFCICSVFLVIVPLFTDTINSLIGIGIALSGVPFYFMGVYLPESRRPLFIRNVLAAITRG
TQQLCFCVLTELDVAEEKKDERKTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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