NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS4095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4095.1 Public Homo sapiens 5 MACIR 24 110 108 CCDS HistoryNCBI Gene:90355Re-query CCDS DB by CCDS ID:4095.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4095.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319933.7 ENSP00000326110.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319933.7Link to Ensembl Protein Viewer:ENSP00000326110.2Re-query CCDS DB by Nucleotide ID:ENST00000319933Re-query CCDS DB by Protein ID:ENSP00000326110
Original member Current member EBI ENST00000510890.1 ENSP00000421270.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000510890.1Link to Ensembl Protein Viewer:ENSP00000421270.1Re-query CCDS DB by Nucleotide ID:ENST00000510890Re-query CCDS DB by Protein ID:ENSP00000421270
Original member Current member EBI ENST00000515669.5 ENSP00000422836.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000515669.5Link to Ensembl Protein Viewer:ENSP00000422836.1Re-query CCDS DB by Nucleotide ID:ENST00000515669Re-query CCDS DB by Protein ID:ENSP00000422836
Original member Current member NCBI NM_001316968.2 NP_001303897.1 Accepted alive Link to Nucleotide Sequence:NM_001316968.2Link to Protein Sequence:NP_001303897.1Re-query CCDS DB by Nucleotide ID:NM_001316968Re-query CCDS DB by Protein ID:NP_001303897Link to BLAST:NP_001303897.1
Original member Current member NCBI NM_001316969.2 NP_001303898.1 Accepted alive Link to Nucleotide Sequence:NM_001316969.2Link to Protein Sequence:NP_001303898.1Re-query CCDS DB by Nucleotide ID:NM_001316969Re-query CCDS DB by Protein ID:NP_001303898Link to BLAST:NP_001303898.1
Original member Current member NCBI NM_001377283.1 NP_001364212.1 Accepted alive Link to Nucleotide Sequence:NM_001377283.1Link to Protein Sequence:NP_001364212.1Re-query CCDS DB by Nucleotide ID:NM_001377283Re-query CCDS DB by Protein ID:NP_001364212Link to BLAST:NP_001364212.1
Original member Current member NCBI NM_001377284.1 NP_001364213.1 Accepted alive Link to Nucleotide Sequence:NM_001377284.1Link to Protein Sequence:NP_001364213.1Re-query CCDS DB by Nucleotide ID:NM_001377284Re-query CCDS DB by Protein ID:NP_001364213Link to BLAST:NP_001364213.1
Original member Current member NCBI NM_001377285.1 NP_001364214.1 Accepted alive Link to Nucleotide Sequence:NM_001377285.1Link to Protein Sequence:NP_001364214.1Re-query CCDS DB by Nucleotide ID:NM_001377285Re-query CCDS DB by Protein ID:NP_001364214Link to BLAST:NP_001364214.1
Original member Current member NCBI NM_001377286.1 NP_001364215.1 Accepted alive Link to Nucleotide Sequence:NM_001377286.1Link to Protein Sequence:NP_001364215.1Re-query CCDS DB by Nucleotide ID:NM_001377286Re-query CCDS DB by Protein ID:NP_001364215Link to BLAST:NP_001364215.1
Original member Current member NCBI NM_001377287.1 NP_001364216.1 Accepted alive Link to Nucleotide Sequence:NM_001377287.1Link to Protein Sequence:NP_001364216.1Re-query CCDS DB by Nucleotide ID:NM_001377287Re-query CCDS DB by Protein ID:NP_001364216Link to BLAST:NP_001364216.1
Original member Current member NCBI NM_001377288.1 NP_001364217.1 Accepted alive Link to Nucleotide Sequence:NM_001377288.1Link to Protein Sequence:NP_001364217.1Re-query CCDS DB by Nucleotide ID:NM_001377288Re-query CCDS DB by Protein ID:NP_001364217Link to BLAST:NP_001364217.1
Original member Current member NCBI NM_033211.4 NP_149988.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033211.4Link to Protein Sequence:NP_149988.1Re-query CCDS DB by Nucleotide ID:NM_033211Re-query CCDS DB by Protein ID:NP_149988Link to BLAST:NP_149988.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001303897.1 206 Q96GV9 206 100% 0 0
NP_001303898.1 206 Q96GV9 206 100% 0 0
NP_001364212.1 206 Q96GV9 206 100% 0 0
NP_001364213.1 206 Q96GV9 206 100% 0 0
NP_001364214.1 206 Q96GV9 206 100% 0 0
NP_001364215.1 206 Q96GV9 206 100% 0 0
NP_001364216.1 206 Q96GV9 206 100% 0 0
NP_001364217.1 206 Q96GV9 206 100% 0 0
NP_149988.1 206 Q96GV9 206 100% 0 0

Chromosomal Locations for CCDS 4095.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 103275920 103276540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (621 nt):
ATGGAAGTCGATATTAATGGAGAGTCTAGAAGTACCCTGACCACCTTGCCCTTCCCTGGGGCTGAGGCCA
ACTCCCCGGGAAAGGCGGAGGCAGAGAAGCCCCGCTGCTCCAGCACACCCTGCTCCCCGATGCGGAGGAC
CGTGTCAGGCTACCAGATCCTACACATGGACTCTAACTATTTGGTTGGCTTCACGACTGGCGAGGAACTC
CTGAAGTTAGCTCAGAAGTGCACAGGAGGTGAAGAGAGCAAAGCAGAAGCCATGCCATCCTTACGCTCCA
AACAGCTAGATGCAGGACTTGCCCGTTCCTCTCGTTTGTATAAAACCAGAAGTAGGTACTACCAGCCATA
CGAGATTCCAGCTGTCAATGGCAGGAGGCGAAGGCGGATGCCAAGCTCAGGAGACAAGTGCACTAAATCT
TTACCTTATGAACCTTACAAGGCCCTCCATGGGCCTCTGCCTCTTTGTCTTCTTAAAGGTAAGAGGGCTC
ACTCCAAATCTCTGGACTACCTCAATCTAGATAAAATGATCAAGGAGCCAGCTGATACAGAAGTGCTACA
GTACCAGCTTCAACACCTAACCCTCCGAGGGGACCGTGTGTTTGCTAGGAATAATACATGA

Translation (206 aa):
MEVDINGESRSTLTTLPFPGAEANSPGKAEAEKPRCSSTPCSPMRRTVSGYQILHMDSNYLVGFTTGEEL
LKLAQKCTGGEESKAEAMPSLRSKQLDAGLARSSRLYKTRSRYYQPYEIPAVNGRRRRRMPSSGDKCTKS
LPYEPYKALHGPLPLCLLKGKRAHSKSLDYLNLDKMIKEPADTEVLQYQLQHLTLRGDRVFARNNT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH