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Report for CCDS2994.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2994.1 Public Homo sapiens 3 CFAP91 24 110 108 CCDS HistoryNCBI Gene:89876Re-query CCDS DB by CCDS ID:2994.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2994.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273390.9 ENSP00000273390.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273390.9Link to Ensembl Protein Viewer:ENSP00000273390.5Re-query CCDS DB by Nucleotide ID:ENST00000273390Re-query CCDS DB by Protein ID:ENSP00000273390
Original member Current member EBI ENST00000648112.1 ENSP00000497876.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648112.1Link to Ensembl Protein Viewer:ENSP00000497876.1Re-query CCDS DB by Nucleotide ID:ENST00000648112Re-query CCDS DB by Protein ID:ENSP00000497876
Original member Current member NCBI NM_033364.4 NP_203528.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033364.4Link to Protein Sequence:NP_203528.3Re-query CCDS DB by Nucleotide ID:NM_033364Re-query CCDS DB by Protein ID:NP_203528Link to BLAST:NP_203528.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_203528.3 767 Q7Z4T9-7 767 100% 0 0

Chromosomal Locations for CCDS 2994.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 119703099 119703222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119706809 119706885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119707404 119707561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119708591 119708674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119709839 119709895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119715562 119715743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119726171 119726348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119730220 119730377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119732294 119732476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119733364 119733506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119737366 119737482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119739255 119739326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119740549 119740695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119743975 119744196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119747115 119747263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119747811 119747902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 119750937 119751097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2304 nt):
ATGAGCCACGCAGTAACCATCGAGGAGCCCCAGGCCCAGCCGCAGGTGTCTCAAACTCGGTACCGGGAGA
GGTCGCGGGCTGGGAGCCACATCTCCTCCAATCGAGCGTATGATTTTCTGTACGATCCATTGTTTATTGT
GTCAAGTGAGAAAGACCATACACAGGCAAATATCCAAGCTACCCTGATTCGCAGCAGACTGAGAAAAGTT
CCCAGGTTTAAAACCATGTTCAGTAACCTGATCCATTATCCAAGATATTCTCTATATTGGAGCAAGTCAG
ATCCTGTCCCACCATTTATCAGTCGGGAATGGAAGGGACATAAGGAGAAACACAGAGAAGCCCTCCGGCA
GCTCACCACAACTGACGCTTCTTTTCAGATGCCTAAAGAAGTTTATGAAGATCCTGAAGTTACTGGAAAG
AATCGCTATAAATACTTTGAAAGGCCTTTTCTCCCATTTTTTCAGCAGATGCCATTCAATGTTGTTTATG
CCGTATCCAAGGCAGAACCATACACTTTTCCTCCTACTTCTACTAAGCACCTATCCATCCCTTCAAAGTC
TACTGTGGGCACTCAGACTGATTATCGGGATGCTGACGTTCAAACAGATCCATACTCTGCAGAATATGTA
GTATGTCAGGACTCAATCCCTGAGCTCTTGACCCTGGCTACGCTTACTTGGGGTCGGGGTCTCCCAGCAG
GACAAGCTGAGGTGGAGATGATAGAAAGAGCCCGCGAGAAGCGTGCTTGGGAAGCCTCTCTCCCCGCTCT
GAGTGACACCTCCCAGTTTGAGAAGAGGAGGAAAATGATGAATGAAATGGAGAGGAAGGAGTGGGCCTTC
AGAGAGCAGGAGATTGAAAAACTGCAGGAGATTCGCCTGGAAGTTCTAAAAGAGCTGTTGAGGAAGCGTG
AAGAGAATCAGAATGAAGTGAATATGAAGCACTTGAATGCCCGGTGGTCTAAACTGCAGGAGGGAAAAGA
GGCAAAAATGGCAAAAATTCAGCGCACGCATGTATCAACAATCAGAAAACTTGTAGGAAAGAGAAAGAAT
ATAGAAGGGAAGTTGGAGAGAAGAAATATCATCAAGGATTATTCTGATTATGCATCACAGGTCTATGGAC
CTCTGTCTCGTCTTGGGTGTTTCCCAGACAACAACTCAGAGGACTTTGTAGTAAAAAACTACTATCTCAA
CACCTATGAAGGATTAGTGGAACTTGAGTCATGTCTCCCAGATTTTGTGACACAACCCCAAATCAGAGCT
CCAAAACCTAAAGTCATTACCACCAAAGCTGGTTTTCTGAAGAGGGCAGCAAGGTTGGACTATGAGTTGG
CAGAGGTTCATAAGGCACTGTTGGATAAGAAGAATAAAGTTCTTGAAGTAAAGAAACCCCCTCGCTTCCT
TCAAAGAAACCCAATACCTCAACCTCGGCTTCCAACTCCAACCTTGGAAATGACGTCCAATGAAGAAGAA
GAAATGGAAATGGCTGTGATCTACCTTCAAAAGTTACTCCGGGGCAGAGTCGTTCAGAACATGATGTTTG
AAGGGAAAGAAAAGCGACTGGAGTTGATCCAGGAGTTGCGCACCTGCCACGCACTACAAGAAGATGAAAA
GCTGGTGAAAAAAGCCGAGAAGCAAGTGACCCTGGCCTTACAGCGGCAGAGGAACTTGCATGAGCACAAG
GTGTCACTGGTTGAAAACCATTTGGCCGGACTGGAAGGAAGGGCACTAGCAGACATGTTTGACTTCCTGT
CCAAAGAGCTGGTGAGACTGCAGGAGGAGAGGAGGATCCATGCCTTTGTCATGCTGGCTGAGCGCCAGCG
GCGGGTACGAGAGGCTGAAGAGAGTGGTCGGCGCCAGGTGGAAAAACAGCGCCTGCGGGAGGAGGACGAG
ATATTTAAGGAGGTGGTTAAAGTTCACCATAGTACTATAAGCTCCTACCTAGAAGACATAATACTGAATA
CCGAAGCGAATACTGCAGAAGAACAAGCCAGGGCAGAAATAGAGAAGATGGCTGAGAAAATCAATGACAT
TGCTTATGAAATGGAAAGCCGCCGAACCTATCTTCAGTCAGAGGAGATTGTTGCTGAGTTGGTTTATAGT
TTTCTGATCCCAGAGGTGCAAAAATACTTTGTCAAAGAAAAAGTGAGGAACGCACAGCGGAAACATATTC
TTGCAGCCCATCAGATCATCCACAGTTACACGGAAAGCATGGTTCAAAAGAAATTAACTGAGGGAGAGCA
AGATGAGGCCTCAAATGCTGCCATGTTACTTGAGAAAGAAACTCAAAATGAGAACAACAGCTAA

Translation (767 aa):
MSHAVTIEEPQAQPQVSQTRYRERSRAGSHISSNRAYDFLYDPLFIVSSEKDHTQANIQATLIRSRLRKV
PRFKTMFSNLIHYPRYSLYWSKSDPVPPFISREWKGHKEKHREALRQLTTTDASFQMPKEVYEDPEVTGK
NRYKYFERPFLPFFQQMPFNVVYAVSKAEPYTFPPTSTKHLSIPSKSTVGTQTDYRDADVQTDPYSAEYV
VCQDSIPELLTLATLTWGRGLPAGQAEVEMIERAREKRAWEASLPALSDTSQFEKRRKMMNEMERKEWAF
REQEIEKLQEIRLEVLKELLRKREENQNEVNMKHLNARWSKLQEGKEAKMAKIQRTHVSTIRKLVGKRKN
IEGKLERRNIIKDYSDYASQVYGPLSRLGCFPDNNSEDFVVKNYYLNTYEGLVELESCLPDFVTQPQIRA
PKPKVITTKAGFLKRAARLDYELAEVHKALLDKKNKVLEVKKPPRFLQRNPIPQPRLPTPTLEMTSNEEE
EMEMAVIYLQKLLRGRVVQNMMFEGKEKRLELIQELRTCHALQEDEKLVKKAEKQVTLALQRQRNLHEHK
VSLVENHLAGLEGRALADMFDFLSKELVRLQEERRIHAFVMLAERQRRVREAEESGRRQVEKQRLREEDE
IFKEVVKVHHSTISSYLEDIILNTEANTAEEQARAEIEKMAEKINDIAYEMESRRTYLQSEEIVAELVYS
FLIPEVQKYFVKEKVRNAQRKHILAAHQIIHSYTESMVQKKLTEGEQDEASNAAMLLEKETQNENNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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