NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32090.1 Public Homo sapiens 14 ACTR10 24 110 108 CCDS HistoryNCBI Gene:55860Re-query CCDS DB by CCDS ID:32090.1Re-query CCDS DB by GeneID:55860See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32090.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254286.9 ENSP00000254286.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254286.9Link to Ensembl Protein Viewer:ENSP00000254286.4Re-query CCDS DB by Nucleotide ID:ENST00000254286Re-query CCDS DB by Protein ID:ENSP00000254286
Original member Current member NCBI NM_018477.3 NP_060947.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018477.3Link to Protein Sequence:NP_060947.1Re-query CCDS DB by Nucleotide ID:NM_018477Re-query CCDS DB by Protein ID:NP_060947Link to BLAST:NP_060947.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060947.1 417 Q9NZ32 417 100% 0 0

Chromosomal Locations for CCDS 32090.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 58200218 58200294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58202855 58202927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58207936 58208018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58208999 58209107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58211292 58211399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58213631 58213698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58215205 58215284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58219694 58219729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58223622 58223701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58223783 58223856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58230399 58230480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58232066 58232267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 58234370 58234551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGCCGCTCTACGAGGGCCTGGGGAGCGGCGGGGAGAAGACGGCGGTCGTGATCGACCTGGGAGAGGCCT
TTACCAAGTGTGGATTTGCTGGAGAAACTGGTCCAAGATGTATAATTCCTAGTGTGATAAAAAGAGCTGG
GATGCCTAAGCCTGTCAGAGTTGTTCAGTATAATATCAATACAGAAGAATTATATTCCTACCTAAAGGAA
TTCATCCACATACTATATTTCAGGCATCTATTGGTGAATCCCAGAGACCGCCGAGTTGTGATTATCGAAT
CGGTATTATGTCCTTCTCACTTCAGAGAGACACTCACTCGTGTTCTTTTCAAATATTTTGAGGTTCCATC
TGTCTTGCTTGCTCCAAGTCATCTAATGGCTCTTCTGACGCTTGGAATTAATTCTGCCATGGTCCTAGAT
TGTGGATATAGGGAAAGCCTGGTGTTACCCATATATGAAGGAATCCCAGTTCTAAATTGTTGGGGAGCAC
TACCCCTAGGAGGAAAAGCTCTTCACAAAGAGTTGGAAACTCAACTATTGGAACAATGTACTGTTGACAC
AAGTGTTGCTAAAGAACAGAGCCTTCCCTCAGTGATGGGTTCAGTTCCGGAAGGTGTCTTAGAGGACATT
AAAGCGCGTACTTGCTTTGTAAGTGATCTGAAGCGAGGACTAAAAATCCAAGCAGCAAAATTTAATATTG
ATGGGAATAATGAGCGTCCCTCCCCACCCCCAAATGTTGACTATCCATTAGATGGAGAGAAGATTTTACA
TATCCTTGGATCAATCAGAGATTCAGTTGTGGAAATTCTTTTTGAACAAGATAATGAAGAGCAATCAGTT
GCCACTTTAATATTGGATTCCCTTATACAGTGTCCGATAGACACCAGGAAGCAACTAGCAGAGAATTTGG
TAGTCATAGGTGGCACTTCTATGTTGCCAGGATTTCTCCACAGATTGCTTGCAGAAATAAGGTATTTGGT
AGAAAAACCAAAATATAAAAAAGCACTTGGCACTAAGACATTTCGAATTCATACTCCACCTGCAAAAGCT
AATTGTGTGGCCTGGTTGGGAGGGGCTATTTTTGGAGCATTACAAGATATACTTGGGAGCCGTTCTGTTT
CAAAGGAATATTATAATCAGACGGGCCGTATACCTGATTGGTGTTCTCTCAATAACCCACCTTTGGAAAT
GATGTTTGATGTCGGGAAAACTCAACCACCTCTGATGAAGAGAGCATTTTCCACTGAGAAATAG

Translation (417 aa):
MPLYEGLGSGGEKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKRAGMPKPVRVVQYNINTEELYSYLKE
FIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLD
CGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMGSVPEGVLEDI
KARTCFVSDLKRGLKIQAAKFNIDGNNERPSPPPNVDYPLDGEKILHILGSIRDSVVEILFEQDNEEQSV
ATLILDSLIQCPIDTRKQLAENLVVIGGTSMLPGFLHRLLAEIRYLVEKPKYKKALGTKTFRIHTPPAKA
NCVAWLGGAIFGALQDILGSRSVSKEYYNQTGRIPDWCSLNNPPLEMMFDVGKTQPPLMKRAFSTEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH