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Report for CCDS18217.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18217.1 Public Mus musculus 4 Gng10 23 108 98 CCDS HistoryNCBI Gene:14700Re-query CCDS DB by CCDS ID:18217.1Re-query CCDS DB by GeneID:14700See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18217.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041160.12 ENSMUSP00000042705.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041160.12Link to Ensembl Protein Viewer:ENSMUSP00000042705.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000041160Re-query CCDS DB by Protein ID:ENSMUSP00000042705
Original member Current member NCBI NM_025277.3 NP_079553.1 Accepted alive Link to Nucleotide Sequence:NM_025277.3Link to Protein Sequence:NP_079553.1Re-query CCDS DB by Nucleotide ID:NM_025277Re-query CCDS DB by Protein ID:NP_079553Link to BLAST:NP_079553.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079553.1 68 Q9CXP8 68 100% 0 0

Chromosomal Locations for CCDS 18217.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 59035238 59035318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 59039227 59039352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (207 nt):
ATGTCTTCCGGGGCCAGCGTGAGCGCCCTGCAGCGCCTGGTGGAGCAGCTGAAGCTGGAGGCTGGCGTGG
AGAGGATCAAGGTCTCCCAGGCAGCTGCAGAGCTTCAGCAGTACTGCATACAGAATGCATGCAAGGACGC
CCTGCTGCTCGGTGTTCCGGCTGGAAGCAACCCCTTCCGGGAGCCCAGGTCCTGTGCTCTACTTTGA

Translation (68 aa):
MSSGASVSALQRLVEQLKLEAGVERIKVSQAAAELQQYCIQNACKDALLLGVPAGSNPFREPRSCALL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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