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Report for CCDS8788.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8788.1 Public Homo sapiens 12 FAM186B 24 110 108 CCDS HistoryNCBI Gene:84070Re-query CCDS DB by CCDS ID:8788.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8788.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257894.2 ENSP00000257894.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257894.2Link to Ensembl Protein Viewer:ENSP00000257894.2Re-query CCDS DB by Nucleotide ID:ENST00000257894Re-query CCDS DB by Protein ID:ENSP00000257894
Original member Current member NCBI NM_032130.3 NP_115506.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032130.3Link to Protein Sequence:NP_115506.1Re-query CCDS DB by Nucleotide ID:NM_032130Re-query CCDS DB by Protein ID:NP_115506Link to BLAST:NP_115506.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115506.1 893 Q8IYM0-1 893 100% 0 0

Chromosomal Locations for CCDS 8788.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49587605 49587752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49588454 49588623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49598755 49598947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49599469 49601134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49603185 49603367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49604313 49604538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49605382 49605477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2682 nt):
ATGGAGAAGGATGACCCCCCACAGTTGGTGACTCCCACATCAGTGAAAGCCATCATCCTGAGGATTGAGG
CTGCCCAGCTAACTCGGGCTCAAGAGGATATTTCTACCCAGCTCTCAGACATTTTGGACAATGTCAATTG
TGTCATCAACCGCTTCCAGGAAGAATTAGGATATGATTTAAAAGAAAATGCCAAATCTCAGCAGAGAGAT
CCAAAGGGCAAGAAGAGATTCATCTTGCTGGAAAAAATTGCCTCCTTCTCCAAAGATGCTATGATGAAGG
AGAAGCACCTGTATGACATTCTCCGCTGGCTGGGTGACTGGGGTGACACTCTGACCTATGAGATTGGGCC
CAGGAAGAGTGAAGAGGAAGCAGCAGCTCTGGACGAATGGATTGAAGTGACGGAGAAAGTGTTACCGCTG
TCCCTCATTGCCACCAAAAGAGGCATCGAGTCACTCACTGCCCTTTGCTCCACTCTCATTGAAGGACAAA
AGAAAAGGTCACAAGTGTCCAAACGCACCTTCTGGCAGGGCTGGCAGGGAAGAAGCCCACAGACATCTCC
ATCCCATCCTCAGCCACTAAGCCCAGAACAGATGCTCCAGGACCAGCATACCATGAACACGAAGGCCTCG
GAGGTGACGTCCATGCTGCAGGAGCTCCTGGACTCTACCATGTTCAGCAAGGGGGAGGTCAGGGCCATCA
GGTACATGGCCACTGTGGTGGAGAACCTCAACAAGGCCTTGATCCTCCAACACAAGGAGAACAGGAGCCT
GGAGACCAAATACAGGCACCTGCAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTTCCAG
CAGTTCATGGAGGTCCTTGAGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAGGT
ACCATGACCTTCTCCTGATGAAGCAGGCCTTGGAGTTCCAGCTGAAGAAGGCTCAGAATGCTACAGGTCA
GGCAGAAGACCTGGCTGAGGTTTCTGTTGACTCCCCAGGTCCCTCTGAGAGAGAGACCCTCCCAAGGAAA
GAAACAGTCATGGAGGAAAGCCAACAGGAACCGATGAAGGAGGAGCAGTTGTTCTCGCCACTTCCCCCAA
GTCCCATGGCCATGATACGGGACAGTGGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGT
GCGCTCGAGGGTCGCAGATGTGTTCGGCAGCAAGGACACTGAGAGCCTTGAGCCTGTGCTTTTACCCTTA
GTAGATCGCAGGTTTCCTAAGAAATGGGAAAGACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGACC
AGGAGGACTACTTCCAGAAGGGAGGACTCCAAATTAAGTTCCACTGTAGCAAGCAGCTGTCTCTAGAGAG
CTCCAGGCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTGGGAGGAGGAATTCGGCCGGGAGATGCGGAGG
CAGCTGTGGCTGGAGGAGGAGGAGATGTGGCAGCAGCGGCAGAAGAAGTGGGCCCTGCTGGAGCAGGAGC
ATCAGGAGAAGCTGCGGCAGTGGAATCTGGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGGTCCAGCT
AGAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCAGAGCAGCTAGGGGAGGATGTGGAGAGGAGGATCTTC
ACACCCACCAGTCGATGGAGGGACTTGGAGAAGGCAGAGCTATCATTAGTGCCTGCCCCAAGCCGGACCC
AATCTGCTCACCAAAGCAGGAGGCCACACTTGCCCATGTCTCCTAGTACCCAGCAGCCTGCCCTGGGAAA
GCAGAGACCTATGAGTTCAGTGGAGTTTACCTACAGACCACGGACCCGCCGAGTTCCCACAAAGCCCAAG
AAATCTGCCTCCTTTCCTGTCACTGGGACATCCATCCGAAGGCTGACCTGGCCCTCTTTGCAGATATCCC
CTGCAAATATTAAGAAGAAGGTGTACCACATGGACATGGAGGCCCAGAGGAAGAACCTGCAGCTCCTGAG
TGAGGAGTCTGAGTTGAGGCTGCCCCACTACCTGCGCAGCAAAGCACTGGAGCTCACCACCACCACCATG
GAGCTGGGCGCGCTCAGGCTGCAGTACCTGTGCCATAAGTACATCTTCTATAGACGCCTCCAGAGCCTCC
GGCAAGAAGCGATCAACCATGTACAAATCATGAAAGAAACGGAGGCTTCCTACAAGGCCCAGAACCTCTA
CATCTTCCTGGAAAACATTGACCGCCTGCAGAGTCTCAGGCTGCAGGCCTGGACGGACAAGCAGAAGGGG
CTGGAGGAGAAGCACCGAGAGTGCCTGAGCAGCATGGTGACCATGTTCCCCAAGCTCCAGCTGGAGTGGA
ACGTTCACCTGAACATCCCTGAGGTCACCTCGCCAAAGCCAAAGAAATGCAAGTTGCCTGCAGCCTCACC
CCGGCACATCCGCCCCAGTGGCCCCACCTACAAGCAGCCCTTTCTGTCTAGGCACCGGGCATGTGTGCCC
CTGCAGATGGCCCGCCAACAGGGGAAGCAGATGGAGGCTGTCTGGAAGACCGAGGTGGCCTCCTCCAGTT
ACGCAATAGAAAAAAAGACCCCTGCCAGCCTTCCCCGGGACCAGCTGAGGGGACACCCAGATATTCCCCG
GCTGTTGACACTGGACGTGTAG

Translation (893 aa):
MEKDDPPQLVTPTSVKAIILRIEAAQLTRAQEDISTQLSDILDNVNCVINRFQEELGYDLKENAKSQQRD
PKGKKRFILLEKIASFSKDAMMKEKHLYDILRWLGDWGDTLTYEIGPRKSEEEAAALDEWIEVTEKVLPL
SLIATKRGIESLTALCSTLIEGQKKRSQVSKRTFWQGWQGRSPQTSPSHPQPLSPEQMLQDQHTMNTKAS
EVTSMLQELLDSTMFSKGEVRAIRYMATVVENLNKALILQHKENRSLETKYRHLQMQATKELSSQRLHFQ
QFMEVLESRRDALLKQVEILGGRYHDLLLMKQALEFQLKKAQNATGQAEDLAEVSVDSPGPSERETLPRK
ETVMEESQQEPMKEEQLFSPLPPSPMAMIRDSGAIAAGHQPLSTMTVRSRVADVFGSKDTESLEPVLLPL
VDRRFPKKWERPVAESLGHKDKDQEDYFQKGGLQIKFHCSKQLSLESSRQVTSESQEEPWEEEFGREMRR
QLWLEEEEMWQQRQKKWALLEQEHQEKLRQWNLEDLAREQQRRWVQLEKEQESPRREPEQLGEDVERRIF
TPTSRWRDLEKAELSLVPAPSRTQSAHQSRRPHLPMSPSTQQPALGKQRPMSSVEFTYRPRTRRVPTKPK
KSASFPVTGTSIRRLTWPSLQISPANIKKKVYHMDMEAQRKNLQLLSEESELRLPHYLRSKALELTTTTM
ELGALRLQYLCHKYIFYRRLQSLRQEAINHVQIMKETEASYKAQNLYIFLENIDRLQSLRLQAWTDKQKG
LEEKHRECLSSMVTMFPKLQLEWNVHLNIPEVTSPKPKKCKLPAASPRHIRPSGPTYKQPFLSRHRACVP
LQMARQQGKQMEAVWKTEVASSSYAIEKKTPASLPRDQLRGHPDIPRLLTLDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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