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Report for CCDS16199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16199.1 Public Mus musculus 2 Prg3 23 108 98 CCDS HistoryNCBI Gene:53856Re-query CCDS DB by CCDS ID:16199.1Re-query CCDS DB by GeneID:53856See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16199.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028466.11 ENSMUSP00000028466.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028466.11Link to Ensembl Protein Viewer:ENSMUSP00000028466.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000028466Re-query CCDS DB by Protein ID:ENSMUSP00000028466
Original member Current member NCBI NM_016914.2 NP_058610.1 Accepted alive Link to Nucleotide Sequence:NM_016914.2Link to Protein Sequence:NP_058610.1Re-query CCDS DB by Nucleotide ID:NM_016914Re-query CCDS DB by Protein ID:NP_058610Link to BLAST:NP_058610.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058610.1 222 Q9JL95-1 222 100% 0 0

Chromosomal Locations for CCDS 16199.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 84988732 84988792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84989225 84989532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84991402 84991533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84992984 84993092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84993708 84993766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGAAACAGCCCCTGATCCTGTCCTTTCTCCTGCTGGGGATGGTTTCTGCTTTTCATCTGGAGACTGCTC
ATCTGGAGAATCCCAAGAGAGAGGAAAGCCTGAAGCAGGAAGCAGATGGTTCGAGGGAGCAAGGGAGAGA
GTTGGCTCTGACTCAAGAGACAAAGCAGACAGAGGGAGAGGAGGTTGAGGGTTCCCAACACCAAGACATT
TTTGAGGATGAGGAGGCAATGGAGTCAGATCCAGATGCCTTAAATAAGGACTCTGCTTGCCCCAAGGAAG
AGGACACAACTCATTTTCAGGGAACTCCTGGGTGCAAGAGCTGCAACTATGTGCTGGTGAGGACTCCCGA
GACATTTGATAAGGCTCAGAGAGTCTGCAGGAGATGCTACCGAGGCAACCTTGCTTCCGTCCACAGTTAT
AGTTTCAACTACCAAATTCAGAACTTGGCCAGGAAGATCAATCAGTCCATCGTCTGGATTGGAGGCATCC
TCAGGGGATGGTTCTGGAAGAAGTTTTGCTGGATGGATGGGAGCTGCTGGGATTTTGGATACTGGGCCCC
AGGGCAGCCTGGGAGTGGGGGAGGACACTGTGTGACTCTGTGTACCAAAGGGGGCCATTGGCGAAGAGCT
TCATGCAAAAGTCACCTGCCTTTCATCTGCTCCTTCTAA

Translation (222 aa):
MKQPLILSFLLLGMVSAFHLETAHLENPKREESLKQEADGSREQGRELALTQETKQTEGEEVEGSQHQDI
FEDEEAMESDPDALNKDSACPKEEDTTHFQGTPGCKSCNYVLVRTPETFDKAQRVCRRCYRGNLASVHSY
SFNYQIQNLARKINQSIVWIGGILRGWFWKKFCWMDGSCWDFGYWAPGQPGSGGGHCVTLCTKGGHWRRA
SCKSHLPFICSF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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