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Report for CCDS11024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11024.1 Public Homo sapiens 17 OR1E1 24 110 108 CCDS HistoryNCBI Gene:8387Re-query CCDS DB by CCDS ID:11024.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11024.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322608.2 ENSP00000313384.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322608.2Link to Ensembl Protein Viewer:ENSP00000313384.2Re-query CCDS DB by Nucleotide ID:ENST00000322608Re-query CCDS DB by Protein ID:ENSP00000313384
Original member Current member NCBI NM_003553.3 NP_003544.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003553.3Link to Protein Sequence:NP_003544.2Re-query CCDS DB by Nucleotide ID:NM_003553Re-query CCDS DB by Protein ID:NP_003544Link to BLAST:NP_003544.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003544.2 314 P30953 314 100% 0 0

Chromosomal Locations for CCDS 11024.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 3397466 3398410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGATGGGACAAAATCAAACCAGCATCTCAGACTTCCTGCTCCTGGGCCTGCCCATCCAACCAGAGCAGC
AAAACCTGTGCTATGCCCTGTTCTTGGCCATGTATCTTACCACCCTCCTGGGGAACCTCCTCATCATTGT
CCTCATTCGACTGGACTCCCATCTCCACACGCCTATGTATTTGTTTCTCAGCAACTTGTCCTTCTCTGAC
CTCTGCTTCTCTTCCGTGACCATTCCCAAGTTGTTACAGAACATGCAGAACCAGGACCCATCCATCCCCT
ATGCGGACTGCCTGACCCAAATGTACTTCTTCCTGTTATTTGGAGACCTGGAGAGCTTCCTCCTTGTGGC
CATGGCCTATGACCGCTATGTGGCCATCTGCTTCCCCCTGCACTACACCGCCATCATGAGCCCCATGCTC
TGTCTCGCCCTGGTGGCGCTGTCCTGGGTGCTGACCACCTTCCATGCCATGTTACACACTTTACTCATGG
CCAGGTTGTGTTTTTGTGCAGACAATGTGATCCCCCACTTTTTCTGTGATATGTCTGCTCTGCTGAAGCT
GGCCTTCTCTGACACTCGAGTTAATGAATGGGTGATATTTATCATGGGAGGGCTCATTCTTGTCATCCCA
TTCCTACTCATCCTTGGGTCCTATGCAAGAATTGTCTCCTCCATCCTCAAGGTCCCTTCTTCTAAGGGTA
TCTGCAAGGCCTTCTCTACTTGTGGCTCCCACCTGTCTGTGGTGTCACTGTTCTATGGAACCGTTATTGG
TCTCTACTTATGCTCATCAGCTAATAGTTCTACTCTAAAGGACACTGTCATGGCTATGATGTACACTGTG
GTGACCCCCATGCTGAACCCCTTCATCTACAGCCTGAGGAACAGAGACATGAAGGGAGCCCTGAGCAGAG
TCATTCATCAGAAGAAAACTTTCTTCTCTCTCTGA

Translation (314 aa):
MMGQNQTSISDFLLLGLPIQPEQQNLCYALFLAMYLTTLLGNLLIIVLIRLDSHLHTPMYLFLSNLSFSD
LCFSSVTIPKLLQNMQNQDPSIPYADCLTQMYFFLLFGDLESFLLVAMAYDRYVAICFPLHYTAIMSPML
CLALVALSWVLTTFHAMLHTLLMARLCFCADNVIPHFFCDMSALLKLAFSDTRVNEWVIFIMGGLILVIP
FLLILGSYARIVSSILKVPSSKGICKAFSTCGSHLSVVSLFYGTVIGLYLCSSANSSTLKDTVMAMMYTV
VTPMLNPFIYSLRNRDMKGALSRVIHQKKTFFSL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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