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Report for CCDS18008.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18008.1 Public Mus musculus 4 Gpr63 23 108 98 CCDS HistoryNCBI Gene:81006Re-query CCDS DB by CCDS ID:18008.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18008.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038920.1 ENSMUSP00000039312.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038920.1Link to Ensembl Protein Viewer:ENSMUSP00000039312.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000038920Re-query CCDS DB by Protein ID:ENSMUSP00000039312
Original member NCBI NM_030733.3 NP_109658.2 Updated not alive Link to Nucleotide Sequence:NM_030733.3Link to Protein Sequence:NP_109658.2Re-query CCDS DB by Nucleotide ID:NM_030733Re-query CCDS DB by Protein ID:NP_109658
Current member NCBI NM_030733.4 NP_109658.2 Accepted alive Link to Nucleotide Sequence:NM_030733.4Link to Protein Sequence:NP_109658.2Re-query CCDS DB by Nucleotide ID:NM_030733Re-query CCDS DB by Protein ID:NP_109658Link to BLAST:NP_109658.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_109658.2 425 Q9EQQ3 425 100% 0 0

Chromosomal Locations for CCDS 18008.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 25007278 25008555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGGTTGTCTCAGGAGTGTTGACTGCTCCGGCAGTGTTGACTGCGCCCCATTCTGGAACATCCAACACGA
CGTTTGTAGTCTTTGAAAACTCCCACGTGAATATTACGGCTCCGCTACCATTTCAGCATCCTAGCGCTGG
TCCGCTGCTTAGATACAGCCTTGAAACCATGACTAGCCCTGGATTTAGCTCCTTGGCAGTGAACAGCACA
GCTGTGACTCCAGCACCAGCAGTTTTTAAGAGCCTAAACTTAGCGGTTCAGATTATCCTTTCAGCCATAA
TGATATTTATTCTCTTTGTGTCTTTCCTTGGAAACTTGGTTGTTTGCCTCATGGTGTACCAAAAAGCTGC
CATGCGTTCTGCAATTAACATCCTCCTTGCCAGCCTGGCGTTTGCAGACATGCTGCTTGCAGTACTGAAC
ATGCCCTTTGCTCTGGTAACTATTCTTACTACCAGATGGATATTTGGGAAATTCTTCTGCCGGTTGTCGG
CTATGTTTTTCTGGTTGTTTGTGATAGAGGGAGTAGCCATCCTGCTCATTATTAGTATCGATAGGTTTCT
GATTATAGTTCAGAGGCAAGATAAGCTAAATCCCTATAGGGCTAAGGTCCTCATTGCAGTCTCCTGGGCA
ACTGCTTTTTCTGTAGCTTTTCCTTTGGCCGTGGGAAACCCTGATCTGCAGATACCTTCCAGAGCCCCAC
AGTGCGTGTTTGGATACACAACCAATTCTGGATACCAGGCTTATGTGATTTTGATTTCACTCATTTCCTT
CTTTATACCTTTCCTGGTCATATTATATTCATTTATGGGCATCCTCAATACCCTTCGGCATAATGCCTTG
AGGATTCATAGCTACCCCGAAGGGATATGCCTCAGCCAGGCCAGCAAACTCGGTCTCATGAGTCTACAGA
GACCCTTCCAAATGAGCATCGACATGGGCTTTAAAACACGTGCCTTTACCACCATTCTGATCCTCTTTGC
CGTTTTCATTGTCTGCTGGGCCCCATTCACCACCTACAGCCTTGTGGCTACCTTCAGTAAGCACTTCTAC
TATCAGCACAACTTCTTTGAGATTAGCACCTGGCTACTCTGGCTCTGCTACCTCAAGTCTGCATTGAACC
CACTGATATACTACTGGAGGATTAAGAAGTTCCACGATGCCTGCTTAGATATGATGCCCAAGTCTTTCAA
GTTCTTGCCACGGCTCCCTGGTCACACAAGGCGACGGATTCGCCCTAGTGCCGTCTACGTGTGTGGGGAA
CATCGGACGGTGTTGTGA

Translation (425 aa):
MVVSGVLTAPAVLTAPHSGTSNTTFVVFENSHVNITAPLPFQHPSAGPLLRYSLETMTSPGFSSLAVNST
AVTPAPAVFKSLNLAVQIILSAIMIFILFVSFLGNLVVCLMVYQKAAMRSAINILLASLAFADMLLAVLN
MPFALVTILTTRWIFGKFFCRLSAMFFWLFVIEGVAILLIISIDRFLIIVQRQDKLNPYRAKVLIAVSWA
TAFSVAFPLAVGNPDLQIPSRAPQCVFGYTTNSGYQAYVILISLISFFIPFLVILYSFMGILNTLRHNAL
RIHSYPEGICLSQASKLGLMSLQRPFQMSIDMGFKTRAFTTILILFAVFIVCWAPFTTYSLVATFSKHFY
YQHNFFEISTWLLWLCYLKSALNPLIYYWRIKKFHDACLDMMPKSFKFLPRLPGHTRRRIRPSAVYVCGE
HRTVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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