CCDS Report for Consensus CDS

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Report for CCDS35825.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
35825.1	Public	Mus musculus	1	Ints7	23	108	98

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35825.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000045450.6	ENSMUSP00000036277.5	Accepted	alive
		NCBI	NM_178632.6	NP_848747.4	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_848747.4	966	Q7TQK1-1	966	99.8965%	0	1

Chromosomal Locations for CCDS 35825.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)

Genome Browser links:

Chromosome	Start	Stop
1	191575858	191575951
1	191582399	191582528
1	191583179	191583325
1	191586524	191586661
1	191594427	191594473
1	191596173	191596372
1	191596887	191597009
1	191602245	191602362
1	191604807	191604941
1	191606121	191606218
1	191607820	191608059
1	191610364	191610501
1	191611858	191612064
1	191613015	191613209
1	191613639	191613742
1	191614579	191614647
1	191615701	191615833
1	191617812	191617910
1	191619596	191619781
1	191621165	191621464

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2901 nt):
ATGGCGTCAAACTCAACCAAGTCGTTCCTGGCCGATGCCGGCTATGGCGAACAGGAGCTGGACGCTAATT CCGCTCTTATGGAACTGGACAAAGGACTGAGGTCTGGCAAACTCGGGGAGCAGTGTGAGGCAGTCGTGCG CTTTCCCAGGCTTTTCCAGAAGTACCCGTTCCCTATCCTCATCAACTCAGCATTCCTAAAGTTAGCTGAT GTTTTCAGAGTTGGAAACAACTTCCTGCGGCTGTGTGTTCTCAAAGTGACGCAGCAAAGTGAGAAGCACC TGGAGAAGATTCTAAATGTGGATGAGTTTGTGAAGAGGGTGTTCTCAGTGATCCACAGTAACGACCCCGT GGCCAGAGCCATCACTCTCCGGATGTTGGGAAGTCTGGCGTCCATCATCCCTGAGAGGAAGAATGCCCAT CACAGTATCCGCCAGAGTCTGGATTCCCATGATAATGTAGAAGTCGAAGCTGCTGTTTTTGCAGCCGCAA ACTTCTCTGCACAGTCGAAGGATTTTGCTGTGGGGATCTGTAACAAAATCAGTGAAATGATTCAAGGCTT AGCTACACCGGTGGACCTGAAGCTGAAGCTGATCCCGATCCTGCAGCACATGCACCACGATGCCCTCCTG GCCTCCAGCGCCCGCCAGCTCCTGCAGCAGCTGGTCACGTCCTACCCCTCCACCAAGATGGTCATCGTGT CTCTGCACACTTTCACTCTGCTGGCAGCCTCCTCTTTGGTTGACACACCCAAGCAGATTCAGCTTCTGCT GCAGTATTTGAAGAATGACCCCAGGAAAGCCGTGAAGAGACTTGCTGTTCAGGATCTGAAGCTGCTTGCT AGTAAGACACCACACACGTGGAGTAAGGAGAATATTCAGGCACTCTGTGAGTGTGCACTGCACACTCCTT ATGACAGCTTGAAACTCGGGATGTTGTCTGTCCTCTCTACGCTGTCAGGAACCATTGCCATTAAACATTA CTTCAGTGTAGTTCCCGGAAATGTAGGCTCTTCCCCCAGATCTTCTGATTTAGTCAAATTAGCTCAAGAA TGCTGTTACCATAGCAACAGGGGCATCGCAGCTCATGGAGTGAGAGTGCTAACTAATATAACAGTGTCTT GTCAAGAAAAAGATCTCTTGTCACTGGAGCAAGATGCTGTCTTCGGCCTGGAATCCCTTCTGGTGCTTTG TAGTCAAGATGACAGTCCAGGTGCTCAATCCACTGTGAAGAGTGCTCTCAGCTGTATGGTGAAGCTGGCC AAGGGCCGGCCCCATCTGAGCAGGTCAGTGGTTGACACTCTGCTAACTCAGCTGCACAGCTCTCAGGATG CTGCCCGGATCCTCATGTGCCACTGCCTGGCAGCCATTGCCATGCAGCTCCCGGTACTGGGCGATGGAAT GCTTGGGGACCTCGTGGAGCTCTACAAGGTGATTGGACGATCAGCCACAGACAAGCAACAGGAACTTCTG GTAAGTTTGGCTACTGTGATTTTCGTAGCCAGCCAGAAAGCATTGTCTGCAGAAGTGAAGGCGGTAATCA AGCAGCAGCTTGAAAGCGTCTCCAGTGGGTGGACCGTGTACCGGATTGCCAGGCAGGCTTCCAGAATGGG CAACCACGACATGGCTCGAGAGCTTTACCAGAGTTTGCTGACGCAGGTTGCATCAGAACACTTCTACTTC TGGCTGAACAGTCTGAAGGAGTTCTCCCATGCGGAGCAGTGTCTGACTGGGCTGCAGGAGGATAGCTTCA GCTCAGCACTTTCCTGCATTGCTGAGTCTTTGAAGTTCTACCACAAAGGGATCGCCTCCCTAACGGCCGC CAGCACACCGCTGAATCCTTTGAGCTTTCAGTGTGAGTTTGTAAAGCTCCGGATCGATCTCCTCCAAGCC TTCTCGCAGCTCATTTGCACGTGTAACAGCCTGAAGACAAGCCCTCCCCCTGCCATCGCCACCACCATCG CCATGACCTTAGGAAACGATCTTCAGAGGTGCGGCCGGATCTCCAATCAGATGAAGCAGTCCATGGAAGA ATTCCGAAGCCTTGCTTCCCGGTACAGAGATCTCTATCAGGCATCCTTTGATGCAGATTCGGCCACTCTG AGGAATGTAGAACTCCAGCAGCAGAGCTGCTTACTGATAGCTCATGCCATAGAAGCCCTGGTTTTGGATC CTGAATCAGCAAGCTTCCAGGAGTATGGGTCCACGGGCGCTGCCCACGCCGACAGTGAGTATGAGAGAAG AATGATGTCCGTGTACAGTCGCGTCCTAGAGGAGGTGGAGTCGCTTAACCGGAAGTATGCCCCAGTTTCC TACATGCACACAGCATGCCTCTGCAATGCCATCATCGCTCTGCTGAAAGTTCCTCTTTCATTTCAGAGAT ACTTTTTCCAGAAACTACAGTCTACCAGCATCAAGCTTGCTCTGTCACCTTCTCCCCGGAGCCCTGCAGA GCCCATTGCTGTGCAGAATAACCAGCAGCTGGCACTAAAGGTAGAAGGCGTTGTTCAGCACGGATCTAAA CCAGGCCTCTTCCGCAGAGTTCAGTCTGTGTGTCTGAATGTTTCCTCCACACTGCAGAGTAAATCTGGCC AAGACTACAAGATTCCCATTGATAGCATGACCAATGAGATGGAGCAGAGGGTTGAGCCACATAATGATTA CTTCAGCACCCAGTTCCTGTTGAACTTTGCTGTCCTTGGAACGCACAGCATCACAGTGGAGTCATCGGTG AGAGATGCCAATGGCATCGTCTGGAAGACTGGCCCCAGAACTACTATGTTTGTCAAATCCCTGGAAGACC CCTACTCCCAGCAGATTCGCCTACAGCAGCAGGCCCAGCAGCCTTTGCAGCCACAGCCACAGCCGCAGCC GCAGCCTCGCAGTGCCTACACCCGGTTTTAG
Translation (966 aa):
MASNSTKSFLADAGYGEQELDANSALMELDKGLRSGKLGEQCEAVVRFPRLFQKYPFPILINSAFLKLAD VFRVGNNFLRLCVLKVTQQSEKHLEKILNVDEFVKRVFSVIHSNDPVARAITLRMLGSLASIIPERKNAH HSIRQSLDSHDNVEVEAAVFAAANFSAQSKDFAVGICNKISEMIQGLATPVDLKLKLIPILQHMHHDALL ASSARQLLQQLVTSYPSTKMVIVSLHTFTLLAASSLVDTPKQIQLLLQYLKNDPRKAVKRLAVQDLKLLA SKTPHTWSKENIQALCECALHTPYDSLKLGMLSVLSTLSGTIAIKHYFSVVPGNVGSSPRSSDLVKLAQE CCYHSNRGIAAHGVRVLTNITVSCQEKDLLSLEQDAVFGLESLLVLCSQDDSPGAQSTVKSALSCMVKLA KGRPHLSRSVVDTLLTQLHSSQDAARILMCHCLAAIAMQLPVLGDGMLGDLVELYKVIGRSATDKQQELL VSLATVIFVASQKALSAEVKAVIKQQLESVSSGWTVYRIARQASRMGNHDMARELYQSLLTQVASEHFYF WLNSLKEFSHAEQCLTGLQEDSFSSALSCIAESLKFYHKGIASLTAASTPLNPLSFQCEFVKLRIDLLQA FSQLICTCNSLKTSPPPAIATTIAMTLGNDLQRCGRISNQMKQSMEEFRSLASRYRDLYQASFDADSATL RNVELQQQSCLLIAHAIEALVLDPESASFQEYGSTGAAHADSEYERRMMSVYSRVLEEVESLNRKYAPVS YMHTACLCNAIIALLKVPLSFQRYFFQKLQSTSIKLALSPSPRSPAEPIAVQNNQQLALKVEGVVQHGSK PGLFRRVQSVCLNVSSTLQSKSGQDYKIPIDSMTNEMEQRVEPHNDYFSTQFLLNFAVLGTHSITVESSV RDANGIVWKTGPRTTMFVKSLEDPYSQQIRLQQQAQQPLQPQPQPQPQPRSAYTRF

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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