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Report for CCDS4440.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4440.1 Public Homo sapiens 5 ZFP2 24 110 108 CCDS HistoryNCBI Gene:80108Re-query CCDS DB by CCDS ID:4440.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4440.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361362.7 ENSP00000354453.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361362.7Link to Ensembl Protein Viewer:ENSP00000354453.2Re-query CCDS DB by Nucleotide ID:ENST00000361362Re-query CCDS DB by Protein ID:ENSP00000354453
Original member Current member EBI ENST00000523286.1 ENSP00000430531.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523286.1Link to Ensembl Protein Viewer:ENSP00000430531.1Re-query CCDS DB by Nucleotide ID:ENST00000523286Re-query CCDS DB by Protein ID:ENSP00000430531
Original member Current member EBI ENST00000520301.5 ENSP00000430980.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520301.5Link to Ensembl Protein Viewer:ENSP00000430980.1Re-query CCDS DB by Nucleotide ID:ENST00000520301Re-query CCDS DB by Protein ID:ENSP00000430980
Original member Current member NCBI NM_030613.4 NP_085116.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030613.4Link to Protein Sequence:NP_085116.2Re-query CCDS DB by Nucleotide ID:NM_030613Re-query CCDS DB by Protein ID:NP_085116Link to BLAST:NP_085116.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_085116.2 461 Q6ZN57 461 100% 0 0

Chromosomal Locations for CCDS 4440.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 178931314 178932699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGGAAAGGGAAGGTATCTGGCATTCTACTCTAGGGGAAACCTGGGAACCTAATAATTGGTTAGAGGGAC
AACAGGATAGTCATCTGAGCCAAGTGGGAGTTACCCATAAGGAAACCTTCACTGAGATGAGAGTATGTGG
AGGTAATGAATTTGAAAGATGTTCCAGTCAGGATTCAATCCTTGATACACAGCAAAGCATTCCTATGGTA
AAAAGGCCCCATAACTGTAATTCACATGGAGAAGATGCCACACAAAATTCTGAGTTAATTAAAACTCAAA
GAATGTTTGTAGGAAAGAAGATCTATGAATGTAATCAGTGCAGCAAAACCTTCAGTCAGAGCTCATCCCT
TCTTAAGCACCAGAGGATTCATACTGGGGAGAAACCCTATAAGTGTAATGTATGTGGGAAACACTTCATT
GAACGATCCTCCCTTACTGTACATCAAAGAATTCATACTGGAGAGAAACCCTATAAATGTAATGAATGTG
GGAAAGCCTTTAGTCAGAGCATGAATCTTACTGTCCATCAACGAACTCACACCGGAGAGAAACCCTATCA
GTGTAAAGAGTGTGGCAAAGCCTTCCATAAGAATTCATCTCTTATTCAGCATGAAAGGATTCATACTGGA
GAGAAACCCTACAAATGTAATGAATGTGGTAAAGCTTTTACCCAAAGCATGAATTTGACAGTTCATCAGA
GAACTCATACAGGAGAAAAACCCTATGAATGTAATGAATGTGGAAAAGCCTTCAGTCAAAGCATGCATCT
TATTGTACATCAGAGAAGCCATACTGGAGAAAAACCCTATGAGTGTAGTCAATGTGGAAAAGCCTTTAGT
AAGAGCTCAACTCTTACCCTACATCAGCGAAATCACACTGGAGAAAAACCTTACAAATGTAACAAATGCG
GGAAATCCTTTAGCCAAAGTACATATCTTATAGAACATCAGAGACTTCATTCTGGAGTAAAACCTTTTGA
ATGTAACGAGTGTGGAAAAGCTTTCAGTAAGAATTCATCTCTAACTCAACATCGGAGAATTCACACTGGA
GAGAAACCTTATGAGTGTATGGTGTGTGGAAAACATTTCACTGGACGATCATCCCTTACCGTGCATCAGG
TCATTCACACTGGAGAGAAACCTTATGAGTGCAATGAATGTGGAAAGGCATTCAGCCAGAGTGCTTACCT
TATTGAACATCAAAGAATTCATACTGGTGAGAAACCCTATGAATGTGATCAGTGTGGAAAAGCCTTCATT
AAGAATTCATCCCTTACAGTGCATCAGAGAACTCATACAGGAGAGAAACCCTATCAGTGTAATGAATGCG
GAAAAGCCTTCAGCCGGAGTACAAACCTTACACGACATCAAAGAACTCATACGTGA

Translation (461 aa):
MEREGIWHSTLGETWEPNNWLEGQQDSHLSQVGVTHKETFTEMRVCGGNEFERCSSQDSILDTQQSIPMV
KRPHNCNSHGEDATQNSELIKTQRMFVGKKIYECNQCSKTFSQSSSLLKHQRIHTGEKPYKCNVCGKHFI
ERSSLTVHQRIHTGEKPYKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERIHTG
EKPYKCNECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQRSHTGEKPYECSQCGKAFS
KSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNECGKAFSKNSSLTQHRRIHTG
EKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFI
KNSSLTVHQRTHTGEKPYQCNECGKAFSRSTNLTRHQRTHT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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