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Report for CCDS100.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
100.2 Public Homo sapiens 1 GPR157 24 110 108 CCDS HistoryNCBI Gene:80045Re-query CCDS DB by CCDS ID:100.2See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 100.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377411.5 ENSP00000366628.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377411.5Link to Ensembl Protein Viewer:ENSP00000366628.4Re-query CCDS DB by Nucleotide ID:ENST00000377411Re-query CCDS DB by Protein ID:ENSP00000366628
Original member Current member NCBI NM_024980.5 NP_079256.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024980.5Link to Protein Sequence:NP_079256.4Re-query CCDS DB by Nucleotide ID:NM_024980Re-query CCDS DB by Protein ID:NP_079256Link to BLAST:NP_079256.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079256.4 335 Q5UAW9 335 100% 0 0

Chromosomal Locations for CCDS 100.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 9104419 9104634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 9105486 9105680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 9111276 9111489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 9128645 9129027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1008 nt):
ATGCAGCCGTCCCCGCCGCCCACCGAGCTGGTGCCGTCGGAGCGCGCCGTGGTGCTGCTGTCGTGCGCAC
TCTCCGCGCTCGGCTCGGGCCTGCTGGTGGCCACGCACGCCCTGTGGCCCGACCTGCGCAGCCGGGCACG
GCGCCTGCTGCTCTTCCTGTCGCTGGCCGACCTGCTCTCGGCCGCCTCCTACTTCTACGGAGTGCTGCAG
AACTTCGCGGGCCCGTCGTGGGACTGCGTGCTGCAGGGCGCGCTGTCCACCTTCGCCAACACCAGCTCCT
TCTTCTGGACCGTGGCCATTGCGCTCTACTTGTACCTCAGCATCGTCCGCGCCGCGCGCGGGCCTCGCAC
AGATCGCCTGCTTTGGGCCTTCCATGTCGTCAGCTGGGGGGTCCCGTTGGTCATCACTGTGGCAGCCGTC
GCCCTGAAGAAGATTGGCTATGACGCCTCGGACGTGTCTGTGGGCTGGTGCTGGATCGACCTGGAGGCCA
AGGACCATGTCCTGTGGATGCTGCTGACGGGGAAGCTGTGGGAGATGCTGGCATATGTGCTGCTGCCTCT
GCTGTACCTCCTGGTCCGGAAGCACATCAACAGAGCGCACACGGCACTCTCTGAGTACCGGCCCATCCTC
TCCCAGGAGCACCGCCTGCTGCGCCACTCCTCCATGGCGGACAAGAAGCTGGTGCTCATCCCGCTCATCT
TCATCGGCCTCAGGGTCTGGAGCACCGTGCGGTTCGTGCTGACCCTCTGTGGCTCCCCGGCCGTGCAGAC
GCCGGTGCTGGTGGTTCTGCATGGTATCGGGAACACGTTTCAGGGAGGTGCCAACTGCATCATGTTCGTC
CTCTGCACCCGCGCCGTCCGAACTCGGCTCTTCTCTCTCTGTTGCTGCTGCTGCTCTTCTCAGCCTCCCA
CCAAGAGCCCGGCTGGCACTCCCAAGGCTCCCGCGCCTTCCAAGCCAGGAGAATCTCAGGAATCCCAAGG
GACCCCAGGGGAACTTCCAAGCACCTGA

Translation (335 aa):
MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLSAASYFYGVLQ
NFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRLLWAFHVVSWGVPLVITVAAV
ALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEMLAYVLLPLLYLLVRKHINRAHTALSEYRPIL
SQEHRLLRHSSMADKKLVLIPLIFIGLRVWSTVRFVLTLCGSPAVQTPVLVVLHGIGNTFQGGANCIMFV
LCTRAVRTRLFSLCCCCCSSQPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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