NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32144.1 Public Homo sapiens 14 RIN3 24 110 108 CCDS HistoryNCBI Gene:79890Re-query CCDS DB by CCDS ID:32144.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32144.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216487.12 ENSP00000216487.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216487.12Link to Ensembl Protein Viewer:ENSP00000216487.7Re-query CCDS DB by Nucleotide ID:ENST00000216487Re-query CCDS DB by Protein ID:ENSP00000216487
Original member Current member NCBI NM_024832.5 NP_079108.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024832.5Link to Protein Sequence:NP_079108.3Re-query CCDS DB by Nucleotide ID:NM_024832Re-query CCDS DB by Protein ID:NP_079108Link to BLAST:NP_079108.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079108.3 985 Q8TB24-1 985 100% 0 0

Chromosomal Locations for CCDS 32144.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 92513933 92513976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92555751 92555955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92577360 92577477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92615407 92615479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92641238 92641329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92651582 92653075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92659161 92659469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92676475 92676606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92684987 92685150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92687926 92688252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2958 nt):
ATGATCCGACACGCCGGGGCGCCCGCGCGCGGGGACCCCACGGGTCCGGTTCCAGTTGTTGGCAAAGGAG
AGGAAGAGGAAGAGGAAGATGGCATGCGGCTTTGTCTGCCAGCCAACCCGAAAAACTGCCTTCCTCACCG
CCGGGGCATCAGCATCCTGGAGAAGCTCATCAAAACATGCCCGGTGTGGCTGCAGCTGAGTCTGGGCCAG
GCAGAGGTGGCCAGGATCCTGCACCGGGTGGTGGCTGGGATGTTCCTGGTTCGCCGGGACAGCAGCTCGA
AGCAGCTGGTGCTCTGTGTCCACTTTCCTTCTCTGAACGAAAGCTCGGCCGAGGTGCTCGAATACACCAT
TAAGGAAGAAAAGTCGATATTGTACCTGGAAGGCTCGGCTCTTGTGTTTGAGGACATCTTCAGATTGATT
GCGTTCTACTGTGTCAGTAGAGACTTACTGCCCTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGCCA
GCAGCTTCACGGACCTTGAGACCATCGCCAACCTGGGTCTGGGTTTCTGGGACTCCTCGCTGAATCCTCC
ACAAGAAAGAGGGAAGCCAGCAGAGCCCCCAAGAGACCGGGCCCCCGGATTCCCCCTAGTCTCCAGCCTC
AGGCCCACAGCCCATGACGCAAACTGTGCCTGTGAAATCGAGCTGTCGGTAGGAAATGACCGCCTGTGGT
TTGTGAATCCTATTTTCATCGAGGACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAATTG
CCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCTCACCCACCTCCAGGTGGGCCCCACGCCGCCCA
CCACCCCCTCCCCCAGTGCTGCCCCTGCAGCCCTGCAGCCCAGCCCAGCCCCCTGTGCTCCCTGCTCTTG
CCCCCGCCCCTGCCTGTCCTTTGCCCACCTCTCCCCCAGTGCCTGCCCCCCACGTCACACCCCATGCCCC
AGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGC
CTGGGCCCCCTCAGGGAGGAAGCGATGAAGCCAGGGGCAGCCTCCAGTCCCTTGCAGCAGGTCCCCGCCC
CGCCACTGCCTGCGAAGAAGAACCTTCCCACTGCCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTT
AGAAGACCAAAGTCCGGGGATGGCGGCAGAGGGGGACCAGCTCAGCCTGCCTCCCCAAGGGACCTCAGAC
GGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGAGGTGAAAGCCAGCGATCCTC
ACAGCATGCCAGAGCTGCCCAGGACAGCCAAACAACCCCCAGTCCCGCCCCCCAGGAAAAAACGGATCTC
TCGACAACTGGCCTCGACCCTCCCAGCTCCCTTAGAGAACGCTGAGCTCTGCACACAGGCGATGGCCTTG
GAGACACCCACGCCGGGTCCACCCAGAGAGGGCCAAAGCCCTGCTTCTCAGGCTGGGACTCAGCACCCTC
CTGCCCAGGCCACTGCCCATTCCCAGAGCTCTCCAGAGTTCAAGGGCTCCCTGGCCTCCCTCTCAGACAG
CTTGGGGGTGTCTGTCATGGCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAG
CAGTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCT
TTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGA
GCTGGCGCAGGACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACTACAAGGTGTACAGCCTGGAGATG
ATGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGGAGATTCGCACCATGATGACCCAGCTCAAGAGCT
ACCTGCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCCCGCCCTGCACTCCGAGGAGGAGCTCGAAGC
AATTGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATCAACTCATGCCTGCAT
CAGATCCACAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCA
CCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGCCCATGATGGAGAAGATCCTGCAGAAGTTCAC
CAGCATGCACAAGGCCTACTCACCTGAGAAGAAGATCTCCATCCTGCTCAAGACCTGCAAACTCATCTAC
GACTCCATGGCCCTCGGCAACCCAGGGAAGCCCTATGGGGCGGATGACTTCCTGCCTGTGCTCATGTATG
TGCTGGCCCGCAGCAACCTCACGGAGATGCTTCTCAATGTGGAGTACATGATGGAGCTCATGGACCCCGC
CCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTGGAGCACATCAAGAGCTAC
GACAAGATCACGGTGACCCGGCAGCTGAGTGTGGAGGTGCAGGACTCCATCCACCGCTGGGAGCGCCGGC
GTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCC
CGAGCAGCAGGCGCGGACGCTGGCGTCGCGGGCGGACACCCAGGCCCAGGCGCTGTGCGCGCAGTGCGCG
GAGAAGTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCTGTTCGTGCTGGTGGACGGGCGCTGCTTCCAGC
TGGCGGACGACGCGCTGCCGCACTGCATCAAGGGCTACCTGCTGCGCAGCGAGCCCAAGCGCGACTTCCA
CTTTGTCTACCGGCCCCTGGACGGTGGTGGCGGCGGCGGCGGCGGGAGCCCGCCCTGCCTGGTGGTGCGG
GAGCCCAACTTCCTGTGA

Translation (985 aa):
MIRHAGAPARGDPTGPVPVVGKGEEEEEEDGMRLCLPANPKNCLPHRRGISILEKLIKTCPVWLQLSLGQ
AEVARILHRVVAGMFLVRRDSSSKQLVLCVHFPSLNESSAEVLEYTIKEEKSILYLEGSALVFEDIFRLI
AFYCVSRDLLPFTLRLPQAILEASSFTDLETIANLGLGFWDSSLNPPQERGKPAEPPRDRAPGFPLVSSL
RPTAHDANCACEIELSVGNDRLWFVNPIFIEDCSSALPTDQPPLGNCPARPLPPTSDATSPTSRWAPRRP
PPPPPVLPLQPCSPAQPPVLPALAPAPACPLPTSPPVPAPHVTPHAPGPPDHPNQPPMMTCERLPCPTAG
LGPLREEAMKPGAASSPLQQVPAPPLPAKKNLPTAPPRRRVSERVSLEDQSPGMAAEGDQLSLPPQGTSD
GPEDTPRESTEQGQDTEVKASDPHSMPELPRTAKQPPVPPPRKKRISRQLASTLPAPLENAELCTQAMAL
ETPTPGPPREGQSPASQAGTQHPPAQATAHSQSSPEFKGSLASLSDSLGVSVMATDQDSYSTSSTEEELE
QFSSPSVKKKPSMILGKARHRLSFASFSSMFHAFLSNNRKLYKKVVELAQDKGSYFGSLVQDYKVYSLEM
MARQTSSTEMLQEIRTMMTQLKSYLLQSTELKALVDPALHSEEELEAIVESALYKCVLKPLKEAINSCLH
QIHSKDGSLQQLKENQLVILATTTTDLGVTTSVPEVPMMEKILQKFTSMHKAYSPEKKISILLKTCKLIY
DSMALGNPGKPYGADDFLPVLMYVLARSNLTEMLLNVEYMMELMDPALQLGEGSYYLTTTYGALEHIKSY
DKITVTRQLSVEVQDSIHRWERRRTLNKARASRSSVQDFICVSYLEPEQQARTLASRADTQAQALCAQCA
EKFAVERPQAHRLFVLVDGRCFQLADDALPHCIKGYLLRSEPKRDFHFVYRPLDGGGGGGGGSPPCLVVR
EPNFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH