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Report for CCDS7820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7820.1 Public Homo sapiens 11 CALCB 24 110 108 CCDS HistoryNCBI Gene:797Re-query CCDS DB by CCDS ID:7820.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7820.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324229.11 ENSP00000346017.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324229.11Link to Ensembl Protein Viewer:ENSP00000346017.5Re-query CCDS DB by Nucleotide ID:ENST00000324229Re-query CCDS DB by Protein ID:ENSP00000346017
Original member Current member EBI ENST00000533448.1 ENSP00000433490.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533448.1Link to Ensembl Protein Viewer:ENSP00000433490.1Re-query CCDS DB by Nucleotide ID:ENST00000533448Re-query CCDS DB by Protein ID:ENSP00000433490
Original member Current member NCBI NM_000728.4 NP_000719.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000728.4Link to Protein Sequence:NP_000719.1Re-query CCDS DB by Nucleotide ID:NM_000728Re-query CCDS DB by Protein ID:NP_000719Link to BLAST:NP_000719.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000719.1 127 P10092 127 100% 0 0

Chromosomal Locations for CCDS 7820.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 15074719 15074804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 15075061 15075198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 15077286 15077445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGGGTTTCCGGAAGTTCTCCCCCTTCCTGGCTCTCAGTATCTTGGTCCTGTACCAGGCGGGCAGCCTCC
AGGCGGCGCCATTCAGGTCTGCCCTGGAGAGCAGCCCAGACCCGGCCACACTCAGTAAAGAGGACGCGCG
CCTCCTGCTGGCTGCACTGGTGCAGGACTATGTGCAGATGAAGGCCAGTGAGCTGAAGCAGGAGCAGGAG
ACACAGGGCTCCAGCTCCGCTGCCCAGAAGAGAGCCTGCAACACTGCCACCTGTGTGACTCATCGGCTGG
CAGGCTTGCTGAGCAGATCAGGGGGCATGGTGAAGAGCAACTTCGTGCCCACCAATGTGGGTTCCAAAGC
CTTTGGCAGGCGCCGCAGGGACCTTCAAGCCTGA

Translation (127 aa):
MGFRKFSPFLALSILVLYQAGSLQAAPFRSALESSPDPATLSKEDARLLLAALVQDYVQMKASELKQEQE
TQGSSSAAQKRACNTATCVTHRLAGLLSRSGGMVKSNFVPTNVGSKAFGRRRRDLQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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