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Report for CCDS32025.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32025.1 Public Homo sapiens 14 OR4K1 24 110 108 CCDS HistoryNCBI Gene:79544Re-query CCDS DB by CCDS ID:32025.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32025.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285600.4 ENSP00000285600.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000285600.4Link to Ensembl Protein Viewer:ENSP00000285600.3Re-query CCDS DB by Nucleotide ID:ENST00000285600Re-query CCDS DB by Protein ID:ENSP00000285600
Original member Current member EBI ENST00000641172.1 ENSP00000493193.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641172.1Link to Ensembl Protein Viewer:ENSP00000493193.1Re-query CCDS DB by Nucleotide ID:ENST00000641172Re-query CCDS DB by Protein ID:ENSP00000493193
Original member Current member EBI ENST00000641429.1 ENSP00000493205.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641429.1Link to Ensembl Protein Viewer:ENSP00000493205.1Re-query CCDS DB by Nucleotide ID:ENST00000641429Re-query CCDS DB by Protein ID:ENSP00000493205
Original member Current member NCBI NM_001004063.3 NP_001004063.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004063.3Link to Protein Sequence:NP_001004063.2Re-query CCDS DB by Nucleotide ID:NM_001004063Re-query CCDS DB by Protein ID:NP_001004063Link to BLAST:NP_001004063.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004063.2 311 Q8NGD4 311 100% 0 0

Chromosomal Locations for CCDS 32025.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 19935667 19936602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGCTCACACAAATGAATCGATGGTGTCTGAGTTTGTACTTTTGGGACTCTCTAATTCCTGGGGACTTC
AACTTTTCTTTTTTGCCATCTTCTCTATAGTCTATGTGACATCAGTGCTAGGCAATGTCTTAATTATTGT
CATTATTTCTTTTGACTCCCATTTGAACTCTCCTATGTACTTCTTGCTCAGTAATCTTTCTTTCATTGAT
ATCTGTCAGTCTAACTTTGCCACCCCCAAGATGCTTGTAGACTTTTTTATTGAGCGCAAGACTATCTCCT
TTGAGGGTTGCATGGCCCAGATATTCGTTCTTCACAGTTTTGTTGGGAGTGAGATGATGTTGCTTGTAGC
TATGGCATATGACAGATTTATAGCCATATGTAAGCCTCTGCACTACAGTACAATTATGAACCGGAGGCTC
TGTGTAATTTTTGTGTCTATTTCCTGGGCGGTGGGCGTTCTTCATTCTGTGAGCCACTTGGCTTTTACAG
TGGACCTGCCATTCTGTGGTCCCAATGAGGTGGATAGCTTCTTTTGTGACCTTCCCTTGGTGATAGAGCT
GGCTTGCATGGATACATATGAAATGGAAATTATGACCCTAACGAACAGTGGCCTGATATCATTGAGCTGT
TTCCTGGCTTTAATTATTTCCTACACCATCATTTTGATCGGTGTCCGATGCAGGTCCTCCAGTGGGTCAT
CTAAGGCTCTTTCTACATTAACTGCCCACATCACAGTGGTCATTCTTTTCTTCGGGCCTTGCATTTATTT
CTATATATGGCCTTTTAGCAGACTTCCTGTGGACAAATTTCTTTCTGTGTTCTACACTGTTTGTACTCCC
TTGTTGAACCCCATCATCTACTCTCTGAGGAATGAAGATGTTAAAGCAGCCATGTGGAAGCTGAGAAACC
GTCATGTGAACTCCTGGAAAAACTAG

Translation (311 aa):
MAHTNESMVSEFVLLGLSNSWGLQLFFFAIFSIVYVTSVLGNVLIIVIISFDSHLNSPMYFLLSNLSFID
ICQSNFATPKMLVDFFIERKTISFEGCMAQIFVLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMNRRL
CVIFVSISWAVGVLHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYEMEIMTLTNSGLISLSC
FLALIISYTIILIGVRCRSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLPVDKFLSVFYTVCTP
LLNPIIYSLRNEDVKAAMWKLRNRHVNSWKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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