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Report for CCDS7881.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7881.1 Public Homo sapiens 11 PRRG4 24 110 108 CCDS HistoryNCBI Gene:79056Re-query CCDS DB by CCDS ID:7881.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7881.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257836.4 ENSP00000257836.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257836.4Link to Ensembl Protein Viewer:ENSP00000257836.3Re-query CCDS DB by Nucleotide ID:ENST00000257836Re-query CCDS DB by Protein ID:ENSP00000257836
Original member Current member NCBI NM_024081.6 NP_076986.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024081.6Link to Protein Sequence:NP_076986.1Re-query CCDS DB by Nucleotide ID:NM_024081Re-query CCDS DB by Protein ID:NP_076986Link to BLAST:NP_076986.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076986.1 226 Q9BZD6 226 100% 0 0

Chromosomal Locations for CCDS 7881.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 32830530 32830632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32836658 32836821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32838882 32838930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32840107 32840239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 32853296 32853527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGTTTACGCTTCTGGTTCTACTCAGCCAACTGCCCACAGTTACCCTGGGGTTTCCTCATTGCGCAAGAG
GTCCAAAGGCTTCTAAGCATGCGGGAGAAGAAGTGTTTACATCAAAAGAAGAAGCAAACTTTTTCATACA
TAGACGCCTTCTGTATAATAGATTTGATCTGGAGCTCTTCACTCCCGGCAACCTAGAAAGAGAGTGCAAT
GAAGAACTTTGCAATTATGAGGAAGCCAGAGAGATTTTTGTGGATGAAGATAAAACGATTGCATTTTGGC
AGGAATATTCAGCTAAAGGACCAACCACAAAATCAGATGGCAACAGAGAGAAAATAGATGTTATGGGCCT
TCTGACTGGATTAATTGCTGCTGGAGTATTTTTGGTTATTTTTGGATTACTTGGCTACTATCTTTGTATC
ACTAAGTGTAATAGGCTACAACATCCATGCTCTTCAGCCGTCTATGAAAGGGGGAGGCACACTCCCTCCA
TCATTTTCAGAAGACCTGAGGAGGCTGCCTTGTCTCCATTGCCGCCTTCTGTGGAGGATGCAGGATTACC
TTCTTATGAACAGGCAGTGGCGCTGACCAGAAAACACAGTGTTTCACCACCACCACCATATCCTGGGCAC
ACAAAAGGATTTAGGGTATTTAAAAAATCTATGTCTCTCCCATCTCACTGA

Translation (226 aa):
MFTLLVLLSQLPTVTLGFPHCARGPKASKHAGEEVFTSKEEANFFIHRRLLYNRFDLELFTPGNLERECN
EELCNYEEAREIFVDEDKTIAFWQEYSAKGPTTKSDGNREKIDVMGLLTGLIAAGVFLVIFGLLGYYLCI
TKCNRLQHPCSSAVYERGRHTPSIIFRRPEEAALSPLPPSVEDAGLPSYEQAVALTRKHSVSPPPPYPGH
TKGFRVFKKSMSLPSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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