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Report for CCDS41566.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41566.1 Public Homo sapiens 10 CUEDC2 24 110 108 CCDS HistoryNCBI Gene:79004Re-query CCDS DB by CCDS ID:41566.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41566.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369937.5 ENSP00000358953.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369937.5Link to Ensembl Protein Viewer:ENSP00000358953.4Re-query CCDS DB by Nucleotide ID:ENST00000369937Re-query CCDS DB by Protein ID:ENSP00000358953
Original member Current member NCBI NM_024040.3 NP_076945.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024040.3Link to Protein Sequence:NP_076945.2Re-query CCDS DB by Nucleotide ID:NM_024040Re-query CCDS DB by Protein ID:NP_076945Link to BLAST:NP_076945.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076945.2 287 Q9H467 287 100% 0 0

Chromosomal Locations for CCDS 41566.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 102423426 102423572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102423657 102423717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102423798 102423859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102423996 102424178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102424264 102424394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102424499 102424560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102424649 102424792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102425115 102425188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (864 nt):
ATGGAGCTGGAGAGGATCGTCAGTGCAGCCCTCCTTGCCTTTGTCCAGACACACCTCCCGGAGGCCGACC
TCAGTGGCTTGGATGAGGTCATCTTCTCCTATGTGCTTGGGGTCCTGGAGGACCTGGGCCCCTCGGGCCC
ATCAGAGGAGAACTTCGATATGGAGGCTTTCACTGAGATGATGGAGGCCTATGTGCCTGGCTTCGCCCAC
ATCCCCAGGGGCACAATAGGGGACATGATGCAGAAGCTCTCAGGGCAGCTGAGCGATGCCAGGAACAAAG
AGAACCTGCAACCGCAGAGCTCTGGTGTCCAAGGTCAGGTGCCCATCTCCCCAGAGCCCCTGCAGCGGCC
CGAAATGCTCAAAGAAGAGACTAGGTCTTCGGCTGCTGCTGCTGCAGACACCCAAGATGAGGCAACTGGC
GCTGAGGAGGAGCTTCTGCCAGGGGTGGATGTACTCCTGGAGGTGTTCCCTACCTGTTCGGTGGAGCAGG
CCCAGTGGGTGCTGGCCAAAGCTCGGGGGGACTTGGAAGAAGCTGTGCAGATGCTGGTAGAGGGAAAGGA
AGAGGGGCCTGCAGCCTGGGAGGGCCCCAACCAGGACCTGCCCAGACGCCTCAGAGGCCCCCAAAAGGAT
GAGCTGAAGTCCTTCATCCTGCAGAAGTACATGATGGTGGATAGCGCAGAGGATCAGAAGATTCACCGGC
CCATGGCTCCCAAGGAGGCCCCCAAGAAGCTGATCCGATACATCGACAACCAGGTAGTGAGCACCAAAGG
GGAGCGATTCAAAGATGTGCGGAACCCTGAGGCCGAGGAGATGAAGGCCACATACATCAACCTCAAGCCA
GCCAGAAAGTACCGCTTCCATTGA

Translation (287 aa):
MELERIVSAALLAFVQTHLPEADLSGLDEVIFSYVLGVLEDLGPSGPSEENFDMEAFTEMMEAYVPGFAH
IPRGTIGDMMQKLSGQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATG
AEEELLPGVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQMLVEGKEEGPAAWEGPNQDLPRRLRGPQKD
ELKSFILQKYMMVDSAEDQKIHRPMAPKEAPKKLIRYIDNQVVSTKGERFKDVRNPEAEEMKATYINLKP
ARKYRFH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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