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Report for CCDS36859.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36859.1 Public Mus musculus 14 Galnt15 23 108 98 CCDS HistoryNCBI Gene:78754Re-query CCDS DB by CCDS ID:36859.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36859.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022460.10 ENSMUSP00000022460.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022460.10Link to Ensembl Protein Viewer:ENSMUSP00000022460.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022460Re-query CCDS DB by Protein ID:ENSMUSP00000022460
Original member Current member NCBI NM_030166.3 NP_084442.1 Accepted alive Link to Nucleotide Sequence:NM_030166.3Link to Protein Sequence:NP_084442.1Re-query CCDS DB by Nucleotide ID:NM_030166Re-query CCDS DB by Protein ID:NP_084442Link to BLAST:NP_084442.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084442.1 638 Q9D2N8 638 100% 0 0

Chromosomal Locations for CCDS 36859.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 32029493 32030031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32040356 32040522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32043089 32043293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32046297 32046461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32048044 32048161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32049822 32050016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32052298 32052429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32052785 32052889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32056264 32056407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32058146 32058292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGCTCCCGAGGAAGCGACCCAGGAGTGGACGTTCCAGGCTTCAGTTCCTCCTACTCTTCCTGACTCTGG
GATGTGTCCTGATGATGGTGATCCTGCTGCATCCTCCCCCGCCCACCCTGCACCAGGCTGTCACAGCTCA
GGCCAGCAAACACAGCCCTGACACGGGGTACCGCCTGGACTTTGGAGACTCTCAGGAGTGGGTCCTGGAG
GCTGAGACTGAAGGTGATGAGTACAGTCTCTTGGATGGCCTGCCATCCTTCATCTCCCTGCAGGAGGATC
AACTGCTGGTGGCCGTGGCCTCACCCAGAGCTAGGAGGAGTCAGAGCCAGGGCAGGAGACAGGGCAGCTA
CCAGTTCATCAAACACAGGAGCAGGAGATGGGATGAGGAAGCCCTGGAAAAGGACTGGAGGACCGAAGAG
GATGGGGAGGAATCAGAAGAGGTGCTGACCCCACTTGGCCCGGACTCAGATGGCCTCAACAAGCCACTCA
GTGCCCGCCTGCCCCTGAGGAGAGTCCTGCCCGAGGTGCGACACCCACTGTGTCTGCAGCAGCACCCTAC
AAGTGGCCTGCCTACAGCCAGCGTCATCCTCTGCTTCCATGATGAGGCCTGGCCCACGCTCTTGAGAACT
GTCCACAGCATCCTGGACACAGCACCCAGGGCCCTGCTGCAGGAGATCATCCTTGTAGATGACCTCAGCC
AGCAAGAACTGCTGAAGTCTGCTCTCAGTGAATATGTGGCCAGGCTGGAGGCTGTGAAGTTGCTCAGGAG
CAATAGGAGGCTCGGCACCATTGGAGCCCGGATGCTGGGGGCCACCAGGGCCACAGGGGACGTGCTGGTC
TTCATGGATGCCCACTGTGAGTGCCACCCTGGTTGGCTGGAGCCCCTCCTCAGCAGAATAGCTGATGACA
GGAGCCGAGTGGTGTCTCCAGTCATAGACGTGATTGACTGGAAGACGCTTCAGTACTCCGCATCCAAGCT
GCATCGAGGGACGCTGGATTGGAAGCTGGATTTCCGATGGAAGCCCCTGGGGGAGCAGGAGCAGAAGGCC
CTCCCATCCCCCATCAGCCCTGTCAGGAGCCCTGTGGTACCCCGAGAGGTGGTGGCCGTGGACAGACATT
ACTTCCAAAACACCGGAGCATACGATCCCCTTCTGTCACTGGGGGATAGTGAAAATCTCGAGATGTCTTT
CAAGGCCTGGCTCTGCGGTGGCTCTGTTGAAATCCTTCCCTGCTCTCGAGTGGGACACATCTACCGAAGC
CAAGATGCCAGCTCCAGGCCTGACCCCGAGGTCGCCTTGAAGAACAAGATCATCATTGCTGAGACCTGGC
TATCATCCTTCAAGGAAACCTTCTACAGGCACATCCCAGAGGCCTTCACCCTGAGCAAGGTTGCAAAGCC
AGACTGTACAGAGCGCCTGAAGCTGCAAAGGAGGCTGGGATGCCGGACGTTCCACTGGTTTCTGGCCAAT
GTCTACCCTGAGCTGTACCCATCTGATCACAGGCCCAGGTTCTCTGGAAAGCTCCACAACACTGGATTTG
GCCTCTGTGCGGACTGCCAAGCAGACGGTGACATCCTGGGCTGCCCCATGACACTGGCTCCTTGCAGTAA
CAACCGGCAGCAACAGAACCTGGAGCACACCGGCAGGAAGGAGATTCTCTTCGGCGGCCCACAGCGCCTG
TGCTTCGATGTCAGAGGAGGGCGGGTGATTCTGCAGAACTGCACGGAGGAAGGCCCCGCTATCCATCAGC
AGCACTGGGACTTCCAGGAGGATGGAATGATCATCCATGTTCTTTCTGGAAAATGCATGGAAGCTGGGGT
CCAGCCAAGCAATAAGGACTTGTACTTGCGTCAATGTGATGGTAAAACCAGCCAGCTGTGGAGGTTCGAC
CAGATCCACCCTGTGGATGAACGATGA

Translation (638 aa):
MLPRKRPRSGRSRLQFLLLFLTLGCVLMMVILLHPPPPTLHQAVTAQASKHSPDTGYRLDFGDSQEWVLE
AETEGDEYSLLDGLPSFISLQEDQLLVAVASPRARRSQSQGRRQGSYQFIKHRSRRWDEEALEKDWRTEE
DGEESEEVLTPLGPDSDGLNKPLSARLPLRRVLPEVRHPLCLQQHPTSGLPTASVILCFHDEAWPTLLRT
VHSILDTAPRALLQEIILVDDLSQQELLKSALSEYVARLEAVKLLRSNRRLGTIGARMLGATRATGDVLV
FMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVIDWKTLQYSASKLHRGTLDWKLDFRWKPLGEQEQKA
LPSPISPVRSPVVPREVVAVDRHYFQNTGAYDPLLSLGDSENLEMSFKAWLCGGSVEILPCSRVGHIYRS
QDASSRPDPEVALKNKIIIAETWLSSFKETFYRHIPEAFTLSKVAKPDCTERLKLQRRLGCRTFHWFLAN
VYPELYPSDHRPRFSGKLHNTGFGLCADCQADGDILGCPMTLAPCSNNRQQQNLEHTGRKEILFGGPQRL
CFDVRGGRVILQNCTEEGPAIHQQHWDFQEDGMIIHVLSGKCMEAGVQPSNKDLYLRQCDGKTSQLWRFD
QIHPVDER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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