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Report for CCDS38991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38991.1 Public Mus musculus 4 Morn1 23 108 98 CCDS HistoryNCBI Gene:76866Re-query CCDS DB by CCDS ID:38991.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38991.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030915.10 ENSMUSP00000030915.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030915.10Link to Ensembl Protein Viewer:ENSMUSP00000030915.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000030915Re-query CCDS DB by Protein ID:ENSMUSP00000030915
Original member Current member NCBI NM_001081100.1 NP_001074569.1 Accepted alive Link to Nucleotide Sequence:NM_001081100.1Link to Protein Sequence:NP_001074569.1Re-query CCDS DB by Nucleotide ID:NM_001081100Re-query CCDS DB by Protein ID:NP_001074569Link to BLAST:NP_001074569.1

Chromosomal Locations for CCDS 38991.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 155086606 155086681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155087421 155087492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155089486 155089584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155090883 155090993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155092269 155092359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155093062 155093149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155101266 155101362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155102090 155102200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155110928 155111051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155111417 155111589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155128679 155128800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155128883 155128965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155142402 155142445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155145167 155145309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1434 nt):
ATGGAGGCAGCTGGCGATCCCTACCAGGCTTCGCTCCAGCCGCGTCGGCACTCGCCGAGACTGCCGCCGC
GAAACGGCTATGGCGTATATGTATACCCAAATTCTTTCTTCCGCTATGAAGGAGAATGGAAGGGAGGCAA
GAAACACGGTCATGGGAAGCTATTGTTTAAAGATGGAAGTTACTACGAAGGCGAATTTGTGGATGGAGAA
ATTACTGGGGAAGGCTGCCAGCACTGGGCCTGGTCAGGAAACACCTACTCTGGACAGTTTGTTTTAGGAG
AGCCTCAAGGGCACGGCGTCATGAAGTACAAAGCCGGAGGTCGCTATGAAGGGGAGCTCTCCCAAGGCCT
GAGGGAAGGGCAGGGGTTTCTGGAGGATCAGGACGGGCAGGTATACCAGGGTTCCTTCCATGACAACAAG
AGACATGGCCGTGGGCAGATGATCTTTAAGAATGGTGACAAGTACGAAGGTGATTGGGTTCGAGACCAGC
GTCAGGGACACGGGGTGCTGTGCTGTGCCGACGGCTCCACATACAAGGGACAGTGGCACAGTGATGTCTT
CAGTGGACTCGGCAGCTTGGTCCACTGCTCAGGAGTCACCTACTGTGGGATGTTCATTAACGGCCACCCA
GCAGAACAGGCTAAGAAAATTGTGATTCTGGGTCCAGAGGTACTGGAAGTGGTCCAAGGGTCTCCCTTCA
CGTTGAGTGTACAGCTGCAGCAAGATGATGGGGAAGTTGCCAAAAGTGAGAGTGGCCGGGTCCTGAAGAT
CTCAGCAGGAGTCAGATATGTGCAACTCCCAGAATACTCTGAGGTCAGCTTTTTCAAGATGGATGAAGAC
TACATGGAGACACCCATCCAGACCCCATTTGGGTTCCAGTGCATTTCCTACCCCCTGTCTGTGCCCATGT
CCTGGGGGCCAGAGCCTGGGTCTACTGTGGAAAGTGCCAGAGCTGACCTGCTACTCTCCAAGAGAGACTC
AGAGCCTGTGCTGGACTCAGGAGCCTTCCATGGCCAGGGAGACACCCTCAGCATCCTGCCAGCCAGGAGA
CACAAACCCTGCTGTCAGCAAGTGGACCACGGCTGTGCCGAGTTTGTGGACATCCTCCTCGGAGCCCCTC
CGCCTGGCATGCAGCCTTACCTGTTCCTGCCCGGCACGCTGGAGAAGACTCTCGGCAGGCCTAAAGGTGG
CCCAAGTTCCCCAGAGGTGCTGCCCACTGCCCAGGAACCTCTAAAAGGCACCAACAGGCCTGATGGGACC
ACAGTAGAGCCACCGACAGCTGCATATCTAGGGGAGTATGTGCTCATGGTCTGTGATGTGACCAGCCCTC
CCTTCCTGGGCCACAGGCTGCCCACCACCTTCAAACACCTGCGGATCTTAGCCAAGGGGGACACCCACTG
GCCCCATGTCCCTGAAGATCACCAGAAGCTCTAA

Translation (477 aa):
MEAAGDPYQASLQPRRHSPRLPPRNGYGVYVYPNSFFRYEGEWKGGKKHGHGKLLFKDGSYYEGEFVDGE
ITGEGCQHWAWSGNTYSGQFVLGEPQGHGVMKYKAGGRYEGELSQGLREGQGFLEDQDGQVYQGSFHDNK
RHGRGQMIFKNGDKYEGDWVRDQRQGHGVLCCADGSTYKGQWHSDVFSGLGSLVHCSGVTYCGMFINGHP
AEQAKKIVILGPEVLEVVQGSPFTLSVQLQQDDGEVAKSESGRVLKISAGVRYVQLPEYSEVSFFKMDED
YMETPIQTPFGFQCISYPLSVPMSWGPEPGSTVESARADLLLSKRDSEPVLDSGAFHGQGDTLSILPARR
HKPCCQQVDHGCAEFVDILLGAPPPGMQPYLFLPGTLEKTLGRPKGGPSSPEVLPTAQEPLKGTNRPDGT
TVEPPTAAYLGEYVLMVCDVTSPPFLGHRLPTTFKHLRILAKGDTHWPHVPEDHQKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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