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Report for CCDS15714.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15714.1 Public Mus musculus 2 Msrb2 23 108 98 CCDS HistoryNCBI Gene:76467Re-query CCDS DB by CCDS ID:15714.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 15714.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023856.8 ENSMUSP00000023856.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023856.8Link to Ensembl Protein Viewer:ENSMUSP00000023856.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000023856Re-query CCDS DB by Protein ID:ENSMUSP00000023856
Original member Current member NCBI NM_029619.2 NP_083895.1 Accepted alive Link to Nucleotide Sequence:NM_029619.2Link to Protein Sequence:NP_083895.1Re-query CCDS DB by Nucleotide ID:NM_029619Re-query CCDS DB by Protein ID:NP_083895Link to BLAST:NP_083895.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083895.1 175 Q78J03 175 100% 0 0

Chromosomal Locations for CCDS 15714.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 19371683 19371779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 19378162 19378262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 19383241 19383317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 19393208 19393355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 19394251 19394355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGGCGCGACTGCTGCGAGCGCTGCGGGGTCTGCCTTTGCTGCAGGCGCCTGGACGGCTGGCTCGGGGTT
GCGCGGGATCGGGAAGCAAGGACACAGGGTCTCTTACAAAGTCCAAGCGCTCTCTAAGCGAAGCAGACTG
GCAGAAGAAACTGACCCCGGAACAGTTCTATGTCACCAGAGAGAAAGGAACTGAAGCGCCTTTCAGTGGA
ATGTATTTGAACAACAAGGAGACAGGGATGTACCATTGTGTGTGCTGTGATAGCCCACTCTTCAGTTCTG
AGAAGAAGTACTGTTCTGGCACCGGCTGGCCTTCATTTTCTGAGGCTTACGGCTCAAAAGGCTCAGATGA
AAGTCACACAGGGATCCTGAGACGACTGGACACTTCCTTAGGATGTCCTCGCATGGAGGTGGTCTGCAAG
CAGTGTGAAGCTCACCTTGGCCATGTGTTTCCTGATGGACCCAAGCCCACTGGCCAAAGGTTTTGCATCA
ACAGTGTGGCCCTGAAGTTCAAACCCAGCAAGCCCTGA

Translation (175 aa):
MARLLRALRGLPLLQAPGRLARGCAGSGSKDTGSLTKSKRSLSEADWQKKLTPEQFYVTREKGTEAPFSG
MYLNNKETGMYHCVCCDSPLFSSEKKYCSGTGWPSFSEAYGSKGSDESHTGILRRLDTSLGCPRMEVVCK
QCEAHLGHVFPDGPKPTGQRFCINSVALKFKPSKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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