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Report for CCDS37155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37155.1 Public Mus musculus 15 Ccdc134 23 108 98 CCDS HistoryNCBI Gene:76457Re-query CCDS DB by CCDS ID:37155.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37155.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089174.5 ENSMUSP00000086578.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089174.5Link to Ensembl Protein Viewer:ENSMUSP00000086578.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000089174Re-query CCDS DB by Protein ID:ENSMUSP00000086578
Original member Current member NCBI NM_172428.2 NP_766016.2 Accepted alive Link to Nucleotide Sequence:NM_172428.2Link to Protein Sequence:NP_766016.2Re-query CCDS DB by Nucleotide ID:NM_172428Re-query CCDS DB by Protein ID:NP_766016Link to BLAST:NP_766016.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766016.2 229 Q8C7V8-1 229 100% 0 0

Chromosomal Locations for CCDS 37155.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82130068 82130170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82131424 82131545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82131745 82131829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82134581 82134762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82135070 82135141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82140866 82140991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGGACCTTCTTCAGTTCCTGGCAGCCTTCTCTGTCCTCCTGTGGCCTGGCACGGAAGTCACAGGCGCCC
TGAAGAGCACTCTGGACCCGAGCCTCAAGATTTACAAGAAGATGTTTGAGGTGAAGCGGCGAGAGCAGCT
GTTGGCACTGAAGAACCTGGCGCAGCTGAATGACATCCACCAGCAGTACAAGATCCTGGATGTCATGCTT
AAGGGACTCTTCAAGGTGCTGGAGGACTCCCGCACAGTGCTCATTGCTGCCGATGTGCTTCCAGACGGGC
CGGTCCCCCAGGATGAGAAGCTGAAGGATGCTTTCTCGCACGTGGTGGAGAACACAGCCTTTTTTGGTGA
CGTCGTGCTGCGCTTCCCAAAGATTGTCCACCACTACTTTGACCATAATTCCAACTGGAACCTCCTGATC
CGCTGGGGCATCAGCTTCTGCAACCAGACAGGCGTCTTTGACCAGGGGCCCCACTCACCCATCCTCAGCC
TGATGGCCCAGGAGCTGGGGATCACTGAGAAAGATTCTGACTTCCGGAACCCGTTTAAAACAGACCAGAC
AGAGTTTATTCCTAGCACCGACCCTTTCCAGAAGGCTTTGAGGGAAGAAGAAAAACGCCGCAAGAAGGAG
GAGAGGCGGAAGGAGATCCGGAAAGGCCCGAGGATTTCAAGATCCCAGTCTGAGTTGTAG

Translation (229 aa):
MDLLQFLAAFSVLLWPGTEVTGALKSTLDPSLKIYKKMFEVKRREQLLALKNLAQLNDIHQQYKILDVML
KGLFKVLEDSRTVLIAADVLPDGPVPQDEKLKDAFSHVVENTAFFGDVVLRFPKIVHHYFDHNSNWNLLI
RWGISFCNQTGVFDQGPHSPILSLMAQELGITEKDSDFRNPFKTDQTEFIPSTDPFQKALREEEKRRKKE
ERRKEIRKGPRISRSQSEL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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