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Report for CCDS32380.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32380.1 Public Homo sapiens 16 ZNF174 24 110 108 CCDS HistoryNCBI Gene:7727Re-query CCDS DB by CCDS ID:32380.1Re-query CCDS DB by GeneID:7727See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32380.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344823.9 ENSP00000339781.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344823.9Link to Ensembl Protein Viewer:ENSP00000339781.5Re-query CCDS DB by Nucleotide ID:ENST00000344823Re-query CCDS DB by Protein ID:ENSP00000339781
Original member Current member EBI ENST00000575752.5 ENSP00000461502.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575752.5Link to Ensembl Protein Viewer:ENSP00000461502.1Re-query CCDS DB by Nucleotide ID:ENST00000575752Re-query CCDS DB by Protein ID:ENSP00000461502
Original member Current member NCBI NM_001032292.3 NP_001027463.1 Accepted alive Link to Nucleotide Sequence:NM_001032292.3Link to Protein Sequence:NP_001027463.1Re-query CCDS DB by Nucleotide ID:NM_001032292Re-query CCDS DB by Protein ID:NP_001027463Link to BLAST:NP_001027463.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001027463.1 234 Q15697-2 234 100% 0 0

Chromosomal Locations for CCDS 32380.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3402005 3402406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3404426 3404648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3404909 3404988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGGCAGCTAAAATGGAGATAACTTTAAGCTCCAACACTGAAGCTTCCTCCAAGCAAGAGAGACACATAA
TAGCCAAACTAGAAGAGAAACGGGGCCCTCCTCTGCAAAAAAACTGCCCAGATCCTGAGCTCTGCCGCCA
GAGCTTCAGACGCTTTTGTTATCAAGAGGTGTCTGGACCCCAAGAGGCTCTCTCCCAGCTCCGACAGCTC
TGCCGTCAGTGGTTGCAACCCGAGCTGCACACCAAGGAGCAGATTTTGGAGCTTCTGGTGATGGAGCAGT
TCCTGACCATCCTGCCCCCGGAGATCCAGGCTCGGGTCAGGCATCGATGTCCAATGAGCAGCAAGGAGAT
TGTGACCCTCGTGGAAGATTTTCACAGAGCATCCAAGAAACCAAAGCAGTGGGTGGCCGTTTGTATGCAG
GGGCAAAAGGTGCTCTTGGAGAAAACTGGATCTCAGCTTGGAGAACAGGAACTGCCAGACTTTCAACCGC
AGACTCCTAGGAGAGATCTCAGGGAGAGCTCTCCAGCAGAGCCTTCCCAGGCAGGAGCTTATGACCGGCT
GAGCCCCCATCATTGGGAGAAATCCCCACTCCTCCAAGAACCAACCCCCAAATTGGCTGGGACAGAACTT
CTTATAGAAAAGACAGATCCAAATATGGCCACAGATGAACTTCCATGCAAGCTATGGCTGAGTTTCATTG
CTTAA

Translation (234 aa):
MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQL
CRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQ
GQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYDRLSPHHWEKSPLLQEPTPKLAGTEL
LIEKTDPNMATDELPCKLWLSFIA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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