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Report for CCDS37207.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37207.1 Public Mus musculus 15 Fam186a 23 108 98 CCDS HistoryNCBI Gene:72277Re-query CCDS DB by CCDS ID:37207.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37207.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062631.14 ENSMUSP00000053434.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062631.14Link to Ensembl Protein Viewer:ENSMUSP00000053434.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000062631Re-query CCDS DB by Protein ID:ENSMUSP00000053434
Original member Current member NCBI NM_028180.3 NP_082456.1 Accepted alive Link to Nucleotide Sequence:NM_028180.3Link to Protein Sequence:NP_082456.1Re-query CCDS DB by Nucleotide ID:NM_028180Re-query CCDS DB by Protein ID:NP_082456Link to BLAST:NP_082456.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082456.1 104 Q9D9R9-2 104 100% 0 0

Chromosomal Locations for CCDS 37207.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99918451 99918472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99927700 99927879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99929830 99929942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGCCTTCGATCCCCAGCTTTAAGAAGATACCCGGATTTACCAAACTTCAGCGGCCGGTCTTGGAGTTAT
TAATTGATGACAGCAAAAGATCTGACCTCTTCAAAACACTCGGACAAGCTTCAGTGGAGGCCGTGTGGAA
CGCTGACCTGTCTACGTCAAGCTACCCAATAATAGAGAAGGCACCGATGAGTGCGCTCTGGGCCCAGCTG
GGTGGGTACCCAGATATTCCCAAGCTGCTGCAGTTAGACATTCAGTCGACCTTCAGAAAATCTCTTGCTT
CCATCCGGTCACAGTCTAAGAAGATTCGTAAGTGA

Translation (104 aa):
MPSIPSFKKIPGFTKLQRPVLELLIDDSKRSDLFKTLGQASVEAVWNADLSTSSYPIIEKAPMSALWAQL
GGYPDIPKLLQLDIQSTFRKSLASIRSQSKKIRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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