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Report for CCDS21247.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21247.1 Public Mus musculus 7 Dhdh 23 108 98 CCDS HistoryNCBI Gene:71755Re-query CCDS DB by CCDS ID:21247.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21247.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000011526.6 ENSMUSP00000011526.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000011526.6Link to Ensembl Protein Viewer:ENSMUSP00000011526.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000011526Re-query CCDS DB by Protein ID:ENSMUSP00000011526
Original member Current member NCBI NM_027903.4 NP_082179.1 Accepted alive Link to Nucleotide Sequence:NM_027903.4Link to Protein Sequence:NP_082179.1Re-query CCDS DB by Nucleotide ID:NM_027903Re-query CCDS DB by Protein ID:NP_082179Link to BLAST:NP_082179.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082179.1 333 Q9DBB8 333 100% 0 0

Chromosomal Locations for CCDS 21247.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45475266 45475375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45475605 45475752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45479009 45479133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45481789 45482041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45486741 45486904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45488060 45488171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45488674 45488763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGGCGCTGCGCTGGGGCATCGTGTCGGCTGGCTTAATTGCCAACGACTTTACCACCGTGCTGAGCTCAC
TGCCTTCCTCGGAGCACCAGGTGGTAGCGGTAGCTGCGAGGGACCTGAACCGGGCCGAGGAGTTCGCACA
GAAATTCAACATCCCCAAGGCCTATGGCTCTTATGAGGAACTGGCCAAGGACCCAAACGTGGAGGTGGCC
TACATCGCCACCCAGCACCCCCAGCACAAGCCAGCCGTACTCCTCTGCCTGGCAGCAGGCAAGGCTGTCC
TTTGTGAGAAACCCATGGGCGTGAATGCAGCAGAAGTTCGGGAGATGGTTGCCAAAGCCCGTTCTCAAGG
CGTCTTCCTTATGGAGGCCATTTGGAGCCGATTTTTTCCTGCCATGGAGGCTCTGAGGGAAGTTTTAGTT
CAAGGAACTATCGGAGACCTACGAGTGGCCCGGGCAGAATTCGGATTTGATTTAAGTCATATACCCCGGG
CCACAGACTGGAACCAAGCCGGAGGTGGTCTGCTGGACCTAGGCATCTACTGTGTCCAGTTCTTATCCAT
GATCTTTGGTGCACAGAAGCCAGAGAAGATTTCAGCTGTTGGGAGGATCCATGAAACAGGTGTGGATGAC
ACTGTCAGCGTGCTACTTCAGTATCCAGGAGGGGTTCATGGCAGCTTCACCTGCAGCATCTCCTCCAACC
TCCCCAACACAGCGTATGTGAGTGGTACCAAGGGCATGGCCCAGATTCAAAAATTGTGGGCCCCAACAGA
GCTGGTGGTGAATGGAGAGAGGAAGGAGTTCCCTCCGCCTGTCCTTGGGAAGGACTACAATTTTGTAAAT
GGGTCATGCATGCTCTATGAAGCCAACCACGTGCGTGAGTGCCTGCGTAAAGGTCTTAAGGAGAGTCCTG
TAGTTCCTCTGGCAGAGAGTGAGCTCTTGGCTGAGATCCTTGAGGAGGCGAGGAAGGCCATTGGAGTCAC
CTTCCCCCAGGATAAACGCTGA

Translation (333 aa):
MALRWGIVSAGLIANDFTTVLSSLPSSEHQVVAVAARDLNRAEEFAQKFNIPKAYGSYEELAKDPNVEVA
YIATQHPQHKPAVLLCLAAGKAVLCEKPMGVNAAEVREMVAKARSQGVFLMEAIWSRFFPAMEALREVLV
QGTIGDLRVARAEFGFDLSHIPRATDWNQAGGGLLDLGIYCVQFLSMIFGAQKPEKISAVGRIHETGVDD
TVSVLLQYPGGVHGSFTCSISSNLPNTAYVSGTKGMAQIQKLWAPTELVVNGERKEFPPPVLGKDYNFVN
GSCMLYEANHVRECLRKGLKESPVVPLAESELLAEILEEARKAIGVTFPQDKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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