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Report for CCDS11782.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11782.1 Public Homo sapiens 17 ACTG1 24 110 108 CCDS HistoryNCBI Gene:71Re-query CCDS DB by CCDS ID:11782.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11782.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000575842.5 ENSP00000458162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575842.5Link to Ensembl Protein Viewer:ENSP00000458162.1Re-query CCDS DB by Nucleotide ID:ENST00000575842Re-query CCDS DB by Protein ID:ENSP00000458162
Original member Current member EBI ENST00000573283.7 ENSP00000458435.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000573283.7Link to Ensembl Protein Viewer:ENSP00000458435.1Re-query CCDS DB by Nucleotide ID:ENST00000573283Re-query CCDS DB by Protein ID:ENSP00000458435
Original member Current member EBI ENST00000575659.6 ENSP00000459119.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575659.6Link to Ensembl Protein Viewer:ENSP00000459119.2Re-query CCDS DB by Nucleotide ID:ENST00000575659Re-query CCDS DB by Protein ID:ENSP00000459119
Original member Current member EBI ENST00000575087.5 ENSP00000459124.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575087.5Link to Ensembl Protein Viewer:ENSP00000459124.1Re-query CCDS DB by Nucleotide ID:ENST00000575087Re-query CCDS DB by Protein ID:ENSP00000459124
Original member Current member EBI ENST00000575994.6 ENSP00000460464.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000575994.6Link to Ensembl Protein Viewer:ENSP00000460464.2Re-query CCDS DB by Nucleotide ID:ENST00000575994Re-query CCDS DB by Protein ID:ENSP00000460464
Original member Current member EBI ENST00000571721.6 ENSP00000460660.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571721.6Link to Ensembl Protein Viewer:ENSP00000460660.2Re-query CCDS DB by Nucleotide ID:ENST00000571721Re-query CCDS DB by Protein ID:ENSP00000460660
Original member Current member EBI ENST00000576544.6 ENSP00000461672.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000576544.6Link to Ensembl Protein Viewer:ENSP00000461672.1Re-query CCDS DB by Nucleotide ID:ENST00000576544Re-query CCDS DB by Protein ID:ENSP00000461672
Original member Current member EBI ENST00000570382.2 ENSP00000466346.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000570382.2Link to Ensembl Protein Viewer:ENSP00000466346.2Re-query CCDS DB by Nucleotide ID:ENST00000570382Re-query CCDS DB by Protein ID:ENSP00000466346
Original member Current member EBI ENST00000615544.5 ENSP00000477968.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615544.5Link to Ensembl Protein Viewer:ENSP00000477968.1Re-query CCDS DB by Nucleotide ID:ENST00000615544Re-query CCDS DB by Protein ID:ENSP00000477968
Original member Current member EBI ENST00000681052.1 ENSP00000505060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681052.1Link to Ensembl Protein Viewer:ENSP00000505060.1Re-query CCDS DB by Nucleotide ID:ENST00000681052Re-query CCDS DB by Protein ID:ENSP00000505060
Original member Current member EBI ENST00000680727.1 ENSP00000505193.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680727.1Link to Ensembl Protein Viewer:ENSP00000505193.1Re-query CCDS DB by Nucleotide ID:ENST00000680727Re-query CCDS DB by Protein ID:ENSP00000505193
Original member Current member EBI ENST00000679778.1 ENSP00000505235.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679778.1Link to Ensembl Protein Viewer:ENSP00000505235.1Re-query CCDS DB by Nucleotide ID:ENST00000679778Re-query CCDS DB by Protein ID:ENSP00000505235
Original member Current member EBI ENST00000681842.1 ENSP00000506126.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681842.1Link to Ensembl Protein Viewer:ENSP00000506126.1Re-query CCDS DB by Nucleotide ID:ENST00000681842Re-query CCDS DB by Protein ID:ENSP00000506126
Original member Current member EBI ENST00000679480.1 ENSP00000506201.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679480.1Link to Ensembl Protein Viewer:ENSP00000506201.1Re-query CCDS DB by Nucleotide ID:ENST00000679480Re-query CCDS DB by Protein ID:ENSP00000506201
Original member Current member EBI ENST00000680227.1 ENSP00000506253.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680227.1Link to Ensembl Protein Viewer:ENSP00000506253.1Re-query CCDS DB by Nucleotide ID:ENST00000680227Re-query CCDS DB by Protein ID:ENSP00000506253
Original member Current member NCBI NM_001199954.3 NP_001186883.1 Accepted alive Link to Nucleotide Sequence:NM_001199954.3Link to Protein Sequence:NP_001186883.1Re-query CCDS DB by Nucleotide ID:NM_001199954Re-query CCDS DB by Protein ID:NP_001186883Link to BLAST:NP_001186883.1
Original member Current member NCBI NM_001614.5 NP_001605.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001614.5Link to Protein Sequence:NP_001605.1Re-query CCDS DB by Nucleotide ID:NM_001614Re-query CCDS DB by Protein ID:NP_001605Link to BLAST:NP_001605.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186883.1 375 P63261 375 100% 0 0
NP_001605.1 375 P63261 375 100% 0 0

Chromosomal Locations for CCDS 11782.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81510690 81510833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81510927 81511108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81511188 81511626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81511903 81512142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81512232 81512354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGGAAGAAGAGATCGCCGCGCTGGTCATTGACAATGGCTCCGGCATGTGCAAAGCTGGTTTTGCTGGGG
ACGACGCTCCCCGAGCCGTGTTTCCTTCCATCGTCGGGCGCCCCAGACACCAGGGCGTCATGGTGGGCAT
GGGCCAGAAGGACTCCTACGTGGGCGACGAGGCCCAGAGCAAGCGTGGCATCCTGACCCTGAAGTACCCC
ATTGAGCATGGCATCGTCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGC
TGCGCGTGGCCCCGGAGGAGCACCCAGTGCTGCTGACCGAGGCCCCCCTGAACCCCAAGGCCAACAGAGA
GAAGATGACTCAGATTATGTTTGAGACCTTCAACACCCCGGCCATGTACGTGGCCATCCAGGCCGTGCTG
TCCCTCTACGCCTCTGGGCGCACCACTGGCATTGTCATGGACTCTGGAGACGGGGTCACCCACACGGTGC
CCATCTACGAGGGCTACGCCCTCCCCCACGCCATCCTGCGTCTGGACCTGGCTGGCCGGGACCTGACCGA
CTACCTCATGAAGATCCTCACTGAGCGAGGCTACAGCTTCACCACCACGGCCGAGCGGGAAATCGTGCGC
GACATCAAGGAGAAGCTGTGCTACGTCGCCCTGGACTTCGAGCAGGAGATGGCCACCGCCGCATCCTCCT
CTTCTCTGGAGAAGAGCTACGAGCTGCCCGATGGCCAGGTCATCACCATTGGCAATGAGCGGTTCCGGTG
TCCGGAGGCGCTGTTCCAGCCTTCCTTCCTGGGTATGGAATCTTGCGGCATCCACGAGACCACCTTCAAC
TCCATCATGAAGTGTGACGTGGACATCCGCAAAGACCTGTACGCCAACACGGTGCTGTCGGGCGGCACCA
CCATGTACCCGGGCATTGCCGACAGGATGCAGAAGGAGATCACCGCCCTGGCGCCCAGCACCATGAAGAT
CAAGATCATCGCACCCCCAGAGCGCAAGTACTCGGTGTGGATCGGTGGCTCCATCCTGGCCTCACTGTCC
ACCTTCCAGCAGATGTGGATTAGCAAGCAGGAGTACGACGAGTCGGGCCCCTCCATCGTCCACCGCAAAT
GCTTCTAA

Translation (375 aa):
MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL
SLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFN
SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
TFQQMWISKQEYDESGPSIVHRKCF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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