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Report for CCDS24173.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24173.1 Public Mus musculus 10 Kcnc2 23 108 98 CCDS HistoryNCBI Gene:268345Re-query CCDS DB by CCDS ID:24173.1Re-query CCDS DB by GeneID:268345See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24173.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000219301.1 ENSMUSP00000151579.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000219301.1Link to Ensembl Protein Viewer:ENSMUSP00000151579.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000219301Re-query CCDS DB by Protein ID:ENSMUSP00000151579
Original member Current member NCBI NM_001025581.1 NP_001020752.1 Accepted alive Link to Nucleotide Sequence:NM_001025581.1Link to Protein Sequence:NP_001020752.1Re-query CCDS DB by Nucleotide ID:NM_001025581Re-query CCDS DB by Protein ID:NP_001020752Link to BLAST:NP_001020752.1

Chromosomal Locations for CCDS 24173.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 112271706 112272404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112455608 112456535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112458490 112458654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112461965 112462092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1920 nt):
ATGGGCAAGATCGAGAGCAACGAGAGGGTGATCCTCAATGTCGGGGGTACCAGGCACGAAACCTACCGCA
GCACCCTCAAGACCCTGCCTGGAACTCGCCTGGCCCTTCTTGCCTCCTCTGAACCTCAGGGCGACTGCCT
GACTGCGGCCGGGGACAAGCTGCAACCGCTGCCCCCTCCGCTGTCTCCGCCGCCACGACCGCCTCCCTTG
TCCCCTGTCCCCAGCGGCTGCTTCGAGGGCGGCGCAGGCAACTGCAGTTCGCACGGTGGCAACGGCGGCA
ACGGCGGCAGCGACCACCCTGGGGGAGGCCGCGAATTCTTCTTCGATCGCCACCCAGGAGTATTCGCCTA
TGTGCTCAATTACTACCGCACGGGCAAGCTGCACTGCCCCGCCGACGTGTGCGGGCCGCTCTTCGAGGAA
GAGCTGGCTTTCTGGGGCATCGATGAGACCGACGTGGAGCCCTGCTGCTGGATGACCTACAGGCAGCACC
GGGACGCGGAGGAGGCCCTGGACATCTTTGAGACACCCGACCTCATCGGGGGCGACCCTGGTGATGATGA
GGACCTAGCGGCCAAGAGATTGGGCATTGAGGATGCTGCGGGGCTGGGAGGACCCGATGGCAAGTCAGGC
CGCTGGAGGAAGCTGCAGCCTCGCATGTGGGCTCTTTTTGAGGACCCCTACTCATCTAGAGCCGCTAGGT
TTATTGCTTTTGCTTCTTTGTTCTTCATTTTGGTTTCCATCACAACCTTTTGCCTGGAGACACATGAAGC
TTTCAATATTGTTAAAAACAAGACGGAGCCCGTCATCAATGGCACCAGCCCGGTCCTCCAGTACGAAATC
GAAACGGATCCCGCCCTGACGTACGTGGAAGGAGTATGTGTGGTGTGGTTTACGTTTGAATTTTTAGTCC
GAATTGTTTTCTCACCCAATAAACTTGAATTCATCAAAAATCTCTTGAACATCATTGACTTTGTGGCCAT
CCTCCCCTTCTACCTAGAGGTGGGACTCAGCGGGCTGTCCTCCAAAGCGGCCAAAGATGTGCTCGGCTTT
CTCAGGGTGGTTAGGTTTGTGAGGATCCTGAGAATCTTCAAGCTCACCCGCCATTTCGTAGGTCTGAGGG
TGCTCGGACATACTCTTCGGGCGAGCACCAACGAATTTTTGTTGCTGATCATCTTCCTGGCGCTGGGAGT
TTTGATATTCGCTACGATGATCTACTACGCTGAGAGAGTAGGGGCTCAGCCCAATGACCCTTCAGCTAGT
GAGCACACGCAGTTCAAAAACATCCCCATTGGTTTCTGGTGGGCCGTAGTGACCATGACTACCTTAGGTT
ACGGGGATATGTACCCCCAAACATGGTCAGGGATGTTGGTGGGGGCCTTGTGTGCCCTGGCCGGAGTGCT
GACAATAGCCATGCCTGTGCCTGTCATTGTCAACAATTTTGGAATGTACTACTCCTTGGCAATGGCGAAG
CAGAAACTTCCAAGAAAGAGAAAGAAGCATATTCCTCCTGCCCCTCTGGCAAGCTCGCCTACATTTTGCA
AGACAGAATTGAACATGGCTTGCAACAGTACCCAGAGTGACACATGTCTGGGCAAAGAAAACCGGCTTCT
GGAACATAACAGATCAGTGTTATCAGGTGACGACAGTACAGGAAGTGAGCCGCCATTATCACCTCCAGAA
AGGCTCCCTATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAAACGTGTTTCCTGTTGACGA
CAGGTGATTACACGTGCGCTTCTGATGGAGGAATCAGGAAAGCAAGCACACTAGAGCCCATGGAGAGTAC
TGCACAGACTAAAGGAGACACAAGACCAGAAGCTCATTGGAATTGTGCGCACTTACTCAATTTTGGGTGT
CCTACAGGAAGTTCATTTCCCACCCTCTAA

Translation (639 aa):
MGKIESNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPQGDCLTAAGDKLQPLPPPLSPPPRPPPL
SPVPSGCFEGGAGNCSSHGGNGGNGGSDHPGGGREFFFDRHPGVFAYVLNYYRTGKLHCPADVCGPLFEE
ELAFWGIDETDVEPCCWMTYRQHRDAEEALDIFETPDLIGGDPGDDEDLAAKRLGIEDAAGLGGPDGKSG
RWRKLQPRMWALFEDPYSSRAARFIAFASLFFILVSITTFCLETHEAFNIVKNKTEPVINGTSPVLQYEI
ETDPALTYVEGVCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGF
LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQPNDPSAS
EHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAK
QKLPRKRKKHIPPAPLASSPTFCKTELNMACNSTQSDTCLGKENRLLEHNRSVLSGDDSTGSEPPLSPPE
RLPIRRSSTRDKNRRGETCFLLTTGDYTCASDGGIRKASTLEPMESTAQTKGDTRPEAHWNCAHLLNFGC
PTGSSFPTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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