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Report for CCDS17695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17695.1 Public Mus musculus 3 Dclre1b 23 108 98 CCDS HistoryNCBI Gene:140917Re-query CCDS DB by CCDS ID:17695.1Re-query CCDS DB by GeneID:140917See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17695.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063502.12 ENSMUSP00000067695.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063502.12Link to Ensembl Protein Viewer:ENSMUSP00000067695.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000063502Re-query CCDS DB by Protein ID:ENSMUSP00000067695
Original member Current member NCBI NM_001025312.1 NP_001020483.1 Accepted alive Link to Nucleotide Sequence:NM_001025312.1Link to Protein Sequence:NP_001020483.1Re-query CCDS DB by Nucleotide ID:NM_001025312Re-query CCDS DB by Protein ID:NP_001020483Link to BLAST:NP_001020483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020483.1 415 Q8C7W7-2 415 100% 0 0

Chromosomal Locations for CCDS 17695.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 103802968 103804055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 103807394 103807553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGCTGAAGGAACCTGCTCTGATACTGGGGAAACAGATTCATACTTTGTATCTAGACAACACTAATTGCA
ATCCAGCCCTGGTTCTTCCTTCCCGACAAGAGGCTACTCAGCAGATTGTCCAGCTAATCCGACAGTTCCC
ACAACACAACATAAAAATTGGACTCTATAGTCTAGGAAAAGAATCACTGCTGGAGCAACTAGCCCTTGAG
TTTCGGACCTGGGTGGTATTAAGTCCTCAACGCCTGGAGTTGGTACAGTTGCTGGGCCTGGCAGACGTGT
TCACAGTTGAGGAAGAAGCCGGGCGCATCCATGCTGTGGACCATACGGAGATCTGCCACTCTGCCATGCT
TCAGTGGAACCAGAGTCACCCTACCATTGCTATTTTCCCCACAAGCCGGAAAGTGCGCAGCCCTCACCCC
AGCATCTACACCGTCCCGTACTCTGACCATTCATCTTACTCCGAGCTCCGTGCTTTTGTGGCAGCGCTGA
GGCCTTGTCAGGTGGTGCCCATCGTCCATCAAAAGCCTTGTGGAGAGTTCTTTCAGGACAGCTTGAGTCC
TAGGCTCGCTATGCCTCTGATTCCACACTCTGTGCAGCAGTACATGAGTTCCTCCTCTAGGAAAACAAAT
GTGCTTTGGCAGTTAGAAAGGAGGCTCAAGAGGCCAAGAACTCAGGGTGTTGTGTTTGAATCCCCTGAGG
AGAAAGCTAATCAGGTTAAAGTTGACAGAGACTCAAAGAAGCACAAAAAGGAAAACCTCTCTCCCTGGGC
TGGGCACCTTGAGAGGCTTTGCCCCCATCCTCTGCAGGCCAGGAAGCAGTTGTTCCCAGACTTCTGCAGG
AAAGAACGTGATGAGCCAGTCCTCTTTTGTGACTCCAACAAGATGGCGACTGTGTTGACTGCCCCACTGG
AATTCTCAGTGCAATTACAACCTATAGATGAGTTTCTCTTTCCAGAAACCAGGGAGAAAATTGGCTTAGA
GTCCCCATTGCTGTCAAGGGGAGACAGTGGCTCACCAGCGAGAGGGAACCAAAGTGACTGCGTAGGCTGT
GGTTCTCCCCCGGCTCACATTAGCAGAGCTGTTCCTCTAACTCCTGAGTCCAGGGGCCTGGCGCTAAAAT
ACCTTCTCACTCCAGTGCATTTCCTCCAAGCAGGCTTCTCTTCCAGGAACTTCGACAAGCAAGTGGAAAA
ACACCAGAGAGTACAGCGTAGCAGTCCTGCAGTTCTGAGCCCGGTGGATGTTGGCTAG

Translation (415 aa):
MLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQFPQHNIKIGLYSLGKESLLEQLALE
FRTWVVLSPQRLELVQLLGLADVFTVEEEAGRIHAVDHTEICHSAMLQWNQSHPTIAIFPTSRKVRSPHP
SIYTVPYSDHSSYSELRAFVAALRPCQVVPIVHQKPCGEFFQDSLSPRLAMPLIPHSVQQYMSSSSRKTN
VLWQLERRLKRPRTQGVVFESPEEKANQVKVDRDSKKHKKENLSPWAGHLERLCPHPLQARKQLFPDFCR
KERDEPVLFCDSNKMATVLTAPLEFSVQLQPIDEFLFPETREKIGLESPLLSRGDSGSPARGNQSDCVGC
GSPPAHISRAVPLTPESRGLALKYLLTPVHFLQAGFSSRNFDKQVEKHQRVQRSSPAVLSPVDVG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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