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Report for CCDS26185.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26185.1 Public Mus musculus 12 Bag5 23 108 98 CCDS HistoryNCBI Gene:70369Re-query CCDS DB by CCDS ID:26185.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26185.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054636.6 ENSMUSP00000051049.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054636.6Link to Ensembl Protein Viewer:ENSMUSP00000051049.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000054636Re-query CCDS DB by Protein ID:ENSMUSP00000051049
Original member Current member EBI ENSMUST00000160576.1 ENSMUSP00000125183.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160576.1Link to Ensembl Protein Viewer:ENSMUSP00000125183.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160576Re-query CCDS DB by Protein ID:ENSMUSP00000125183
Original member Current member NCBI NM_001324480.1 NP_001311409.1 Accepted alive Link to Nucleotide Sequence:NM_001324480.1Link to Protein Sequence:NP_001311409.1Re-query CCDS DB by Nucleotide ID:NM_001324480Re-query CCDS DB by Protein ID:NP_001311409Link to BLAST:NP_001311409.1
Original member Current member NCBI NM_001324481.1 NP_001311410.1 Accepted alive Link to Nucleotide Sequence:NM_001324481.1Link to Protein Sequence:NP_001311410.1Re-query CCDS DB by Nucleotide ID:NM_001324481Re-query CCDS DB by Protein ID:NP_001311410Link to BLAST:NP_001311410.1
Original member Current member NCBI NM_001324482.1 NP_001311411.1 Accepted alive Link to Nucleotide Sequence:NM_001324482.1Link to Protein Sequence:NP_001311411.1Re-query CCDS DB by Nucleotide ID:NM_001324482Re-query CCDS DB by Protein ID:NP_001311411Link to BLAST:NP_001311411.1
Original member Current member NCBI NM_027404.2 NP_081680.1 Accepted alive Link to Nucleotide Sequence:NM_027404.2Link to Protein Sequence:NP_081680.1Re-query CCDS DB by Nucleotide ID:NM_027404Re-query CCDS DB by Protein ID:NP_081680Link to BLAST:NP_081680.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001311409.1 447 Q8CI32 447 100% 0 0
NP_001311410.1 447 Q8CI32 447 100% 0 0
NP_001311411.1 447 Q8CI32 447 100% 0 0
NP_081680.1 447 Q8CI32 447 100% 0 0

Chromosomal Locations for CCDS 26185.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 111710044 111711387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1344 nt):
ATGGATATGGGAAACCAACACCCCTCCATTAGTAGGCTTCAGGAGATCCAGCGGGAAGTAAAGGCTATAG
AGCCGCAAGTGGTCGGCTTCAGCGGCCTGTCGGATGACAAGAACTACAAGAGGCTGGAGAGGATTCTGAC
CAAACAACTTTTTGAAATTGACTCTGTGGATACGGAAGGAAAAGGAGATATCCAGCAAGCTAGGAAGCGG
GCGGCACAGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAA
TCCAGAATATCTTTAAGGAGGCTCAGGCCCTTGTGAAAGACAAGATTGTGCCCTTTTACAGCGGAGGCAA
CTGTGTGACTGACGAGTTTGAGGAAGGCATCCAGGACATCATTCTGAGGCTGACGCACGTGAAGACCGGA
GGGAAGGTCTCCTTGCGGAAAGCCAGGTACCGCACGCTCACCAAGATCTGCGCGGTACAGGAGGTTATTG
AGGACTGTATGAAGAAGCAGCCGTCCCTGCCACTGTCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAA
CTCTGTCATGTGCGAGGTGAACAAGGCCAGAGGGACGCTGATCGCACTTCTGATGGGCGTGGACAGTTCC
GAGACTTGCAGGCACTTATCCTGCGTGCTGTCAGGACTGATTGCTGACTTAGATGCTCTAGATGTGTGTG
GGCGTACAGAGATCAGAAATTATCGGAGGGAGGTGGTGGAAGATATCAACAAATTACTGAAATACCTAGA
CTTAGAAGAGGAAGCTGACAGTACACATGCATTTGACCTGGGACAGAACCATTCCATTATAAAAATAGAA
AATGTTCTCAAGAGGATGAGAGAGATAAAAAATGAACTTCTCCAGGCGCAGAGCCCTCCTGAGTTGTACC
TGAGGGCCAAGACAGAGCTGCAGGGCTTGATCGGACAGCTGGATGAAGTGAGTCTGGAGAAAAACCCCTG
CATCCGGGAGGCCAGGAGGAGGGCGGTGATTGAGGTGCAGATCCTGATCACGTACCTGGACCTGAAGGAA
GCCCTCGAGAAGAGGAAGCTGTTCCCATGTGAGGAGCACCCCCCACACAAGGCCGTGTGGGAGATCCTTG
GGAACCTGTCTGAGATCCTGGGCGAAGTCCTTTCATTTGGTGGAAACCGAACTGATAAGAACTACATCCG
TCTGGAGGAGCTACTGACCAAACAGTTGCTGGCTCTGGATGCCGTTGACCCACAGGGAGAAGAGAAGTGT
AAGGCTGCCAGGAAACAGGCTGTGAAACTGGCCCAGAACATCCTCAGCTACCTGGACATGAAGTCGGACG
AGTGGGAGTATTGA

Translation (447 aa):
MDMGNQHPSISRLQEIQREVKAIEPQVVGFSGLSDDKNYKRLERILTKQLFEIDSVDTEGKGDIQQARKR
AAQETERLLKELEQNANHPHRIEIQNIFKEAQALVKDKIVPFYSGGNCVTDEFEEGIQDIILRLTHVKTG
GKVSLRKARYRTLTKICAVQEVIEDCMKKQPSLPLSEDVHPSVAKINSVMCEVNKARGTLIALLMGVDSS
ETCRHLSCVLSGLIADLDALDVCGRTEIRNYRREVVEDINKLLKYLDLEEEADSTHAFDLGQNHSIIKIE
NVLKRMREIKNELLQAQSPPELYLRAKTELQGLIGQLDEVSLEKNPCIREARRRAVIEVQILITYLDLKE
ALEKRKLFPCEEHPPHKAVWEILGNLSEILGEVLSFGGNRTDKNYIRLEELLTKQLLALDAVDPQGEEKC
KAARKQAVKLAQNILSYLDMKSDEWEY


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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