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Report for CCDS51877.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51877.1 Public Mus musculus 6 Mkrn2os 23 108 98 CCDS HistoryNCBI Gene:70291Re-query CCDS DB by CCDS ID:51877.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51877.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112957.1 ENSMUSP00000108580.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112957.1Link to Ensembl Protein Viewer:ENSMUSP00000108580.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112957Re-query CCDS DB by Protein ID:ENSMUSP00000108580
Original member Current member NCBI NM_001101431.1 NP_001094901.1 Accepted alive Link to Nucleotide Sequence:NM_001101431.1Link to Protein Sequence:NP_001094901.1Re-query CCDS DB by Nucleotide ID:NM_001101431Re-query CCDS DB by Protein ID:NP_001094901Link to BLAST:NP_001094901.1

Chromosomal Locations for CCDS 51877.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 115585347 115585569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 115586642 115586804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 115589345 115589394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 115592274 115592491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGCACTTCGAAGGAGCTGGGAAGCCTCTAATTAAATTCAGGCACTGCGAGAGGTCCATCTACACCTTCA
GTGTACCCCAATGCTGCCCTCTCTGCCAGGGGGACGTGGGCTCCACCAGGATAGAGGACGCACCTATCAG
CATCTCAGATCCATTCTCCAACGGTCATCAAGAGAAGTGCGCCTTCCTCCTCAAACCGACGCGAGGGACG
TTCCTTAGGGAGTACGATGGGAAGTCTGATCTGCACGTTGGAATCACTAACACACGCGGGGTCGTGTATA
ATTACAGTGCACGCGGCATACAGCGAGACGAGGCAGGCTGGGAGCGAAGTCTCAGTGTTCCATTAGTACA
GCCTAGCATGTTTGGACTGCTGGACCAGTGGGACAAGTACTTGGAAGACTTCTCTGCTTCGCTGGCCTGG
CTGCCTCATAGGTATGAAGAGAATCAGCACAACTGCCTGACCTTTGCCCTCGCCTTCATTAACTGCATCC
TTGCCATGGAAGGCAGAGAGCAGCTGGACAAGCACGCGTTCACAGAAAAGTACGTGATCCCGAGGACGCG
CCTGGCCTCCAAGTACATCATGCTCTTCAGGGCCATCCAAGAGAGCGGCTTCCACGTGACTGACCATCCC
GACCCACGGACAAGCCCCTCTTAG

Translation (217 aa):
MHFEGAGKPLIKFRHCERSIYTFSVPQCCPLCQGDVGSTRIEDAPISISDPFSNGHQEKCAFLLKPTRGT
FLREYDGKSDLHVGITNTRGVVYNYSARGIQRDEAGWERSLSVPLVQPSMFGLLDQWDKYLEDFSASLAW
LPHRYEENQHNCLTFALAFINCILAMEGREQLDKHAFTEKYVIPRTRLASKYIMLFRAIQESGFHVTDHP
DPRTSPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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