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Report for CCDS56949.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56949.1 Public Mus musculus 14 Gpr15lg 23 108 98 CCDS HistoryNCBI Gene:70045Re-query CCDS DB by CCDS ID:56949.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56949.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000179488.2 ENSMUSP00000136426.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179488.2Link to Ensembl Protein Viewer:ENSMUSP00000136426.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179488Re-query CCDS DB by Protein ID:ENSMUSP00000136426
Original member Current member NCBI NM_001206684.1 NP_001193613.1 Accepted alive Link to Nucleotide Sequence:NM_001206684.1Link to Protein Sequence:NP_001193613.1Re-query CCDS DB by Nucleotide ID:NM_001206684Re-query CCDS DB by Protein ID:NP_001193613Link to BLAST:NP_001193613.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193613.1 78 A0A0B4J1N3 78 100% 0 0

Chromosomal Locations for CCDS 56949.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 37102606 37102691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37107374 37107454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37109979 37110048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (237 nt):
ATGAGACTTCTAGCCCTTTCCGGTCTGCTCTGCATGCTGCTCCTCTGTTTCTGCATTTTCTCCTCAGAAG
GGAGAAGACATCCTGCCAAGTCCTTGAAACTCAGGCGCTGCTGTCACCTATCTCCTAGATCCAAGCTGAC
AACCTGGAAAGGAAACCACACAAGGCCCTGCAGACTCTGCAGAAACAAGCTACCAGTCAAGTCATGGGTG
GTGCCTGGGGCTCTCCCACAGATATAG

Translation (78 aa):
MRLLALSGLLCMLLLCFCIFSSEGRRHPAKSLKLRRCCHLSPRSKLTTWKGNHTRPCRLCRNKLPVKSWV
VPGALPQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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